Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq7565 113 4e-20 seq120499 98.7 9e-16 seq91314 91.5 1e-13 >seq7565 Length=2537 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||||||||||||| || |||||| ||| || ||||| || || Sbjct 30 GTCGACTCCTTCTGAATATTGTAATCGGACAATGTGCGACCATCCTCGAGCTGCTTGCCG 89 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | |||||||||||||| || || || || || || ||||| ||| ||| ||| Sbjct 90 GCAAAAATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGGATCTTCGCCTTC 149 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||| | ||| || | ||| ||||| | ||| | ||| || || |||| ||| Sbjct 150 ACATTTTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGTCTTTCCCGTCAACGTT 209 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 210 TTGACGAAAATCTGCAT 226 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 126974 CCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC 127033 ||||| ||||||||||||||||||| ||||| || ||||| ||||| ||| || | Sbjct 1683 CCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATCTTGGCC 1742 Query 127034 TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGA 127093 || | | ||||| ||||| | | |||||||| | || | || |||||||| ||| Sbjct 1743 TTCACATTTTCGATTGTGTCAGAAGCTTCGACTTCCAATGTGATAGTCTTGCCGGTAAGA 1802 Query 127094 GTTTTTACAAAAATCTGCAT 127113 ||||||||||| |||||||| Sbjct 1803 GTTTTTACAAAGATCTGCAT 1822 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 126974 CCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC 127033 ||||| ||||||||||||||||||| ||||| || || ||||||||| ||| || | Sbjct 371 CCAGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCC 430 Query 127034 TTGAGTTGTTCGACGGTGTCCG-TACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 |||| | |||| |||||| | | || |||||||| | ||| | || || || || || Sbjct 431 TTGACGTTCTCGATGGTGTCGGATGCT-TCGACTTCAAGGGTGATGGTCTTCCCAGTAAG 489 Query 127093 AGTTTTTACAAAAATCTGCATG 127114 ||| || || || || |||||| Sbjct 490 AGTCTTGACGAAGATTTGCATG 511 Score = 91.5 bits (100), Expect = 1e-13 Identities = 98/127 (77%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 126988 TCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGAC 127047 |||||||||||| ||||| || || ||||||||| ||| || ||||| | ||||| Sbjct 2032 TCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTGACATTTTCGAT 2091 Query 127048 GGTGTCCG-TACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAA 127106 ||||| | | || |||||||| | || | || |||||||| || |||||||| |||| Sbjct 2092 TGTGTCGGATGCT-TCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTTTTTACGAAAA 2150 Query 127107 TCTGCAT 127113 ||||||| Sbjct 2151 TCTGCAT 2157 >seq120499 Length=638 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || ||||| ||||||||||||||||||| ||||| || || |||||||| ||| || Sbjct 293 TTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTTG 352 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 ||||| | |||| |||||||| | |||||||| | ||| | || || ||||| Sbjct 353 GCCTTGACGTTCTCGATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTCTTCCCGGTA 412 Query 127091 AGAGTTTTTACAAAAATCTGCATG 127114 || || || || ||||| |||||| Sbjct 413 AGGGTCTTCACGAAAATTTGCATG 436 >seq91314 Length=789 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 126974 CCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC 127033 ||||| | ||||||||||||||||| || || || || ||||||||| ||| || | Sbjct 166 CCAGCAAAAATCAATCGCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATCTTAGCC 225 Query 127034 TTGAGTTGTTCGACGGTGTCCG-TACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 |||| | |||| |||||| | | || |||||||| | || | || || || |||| Sbjct 226 TTGACGTTCTCGATGGTGTCAGATGCT-TCGACTTCCAGTGTGATGGTCTTCCCAGTCAA 284 Query 127093 AGTTTTTACAAAAATCTGCATG 127114 ||| || ||||||||||||||| Sbjct 285 AGTCTTCACAAAAATCTGCATG 306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474582435586160