Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq120499 91.5 1e-13 seq7565 84.2 2e-11 >seq120499 Length=638 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||||||||||||| || || ||||| ||||| || || ||||| || |||| || | Sbjct 3 ATCAATCGTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGAATCTTGGCCTTGA-CGTT 61 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | ||||||||| | |||||||| ||||| | || || ||||| || || || || Sbjct 62 CTCAATGGTGTCGGATGCTTCGACTTCAAGAGTGATAGTCTTCCCGGTAAGGGTCTTGAC 121 Query 45329 AAAAATTTGCAT 45340 ||||||||||| Sbjct 122 GAAAATTTGCAT 133 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||||||| ||||| || || ||||| ||||| || ||||| || || |||| || | Sbjct 305 ATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 363 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | |||||| |||| |||||||| || |||| || || ||||| || || || || Sbjct 364 CTCGATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTCTTCCCGGTAAGGGTCTTCAC 423 Query 45329 AAAAATTTGCAT 45340 ||||||||||| Sbjct 424 GAAAATTTGCAT 435 >seq7565 Length=2537 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||||||| ||||| || || ||||| || ||||| ||||| || || || | | Sbjct 1692 ATCAATCGCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTCACATTT 1751 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | ||||| |||| |||||||| | || | || |||||||| |||||||||||| Sbjct 1752 TCGATTGTGTCAGAAGCTTCGACTTCCAATGTGATAGTCTTGCCGGTAAGAGTTTTTACA 1811 Query 45330 AAAATTTGCAT 45340 || || ||||| Sbjct 1812 AAGATCTGCAT 1822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451130217969640