Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq7565 163 6e-35 seq67160 134 3e-26 seq120499 129 1e-24 seq91314 89.7 1e-12 >seq7565 Length=2537 Score = 163 bits (180), Expect = 6e-35 Identities = 159/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || |||||||||||||||| | || | ||||| |||||||| Sbjct 23 GTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACAATGTGCGACCATCCTCGAGCTG 82 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || || | ||| || |||||||| ||||| |||||||||||||| || || Sbjct 83 CTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGGATCTT 142 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || |||||||| || || |||||||| ||||| | ||||||||| || Sbjct 143 CGCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGTCTTTCCCGT 202 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 ||| ||||| ||||| | |||||| Sbjct 203 CAACGTTTTGACGAAAATCTGCATT 227 Score = 136 bits (150), Expect = 9e-27 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 194999 TACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTT 195058 ||||||| ||||| || ||||| || || ||||||||||| |||||||||||||| || Sbjct 2321 TACCTGCAAAGATCAGACGTTGCTGATCGGGAGGAATGCCCTCTTTGTCTTGAATCTTGG 2380 Query 195059 GCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCA 195118 |||||| |||||||| ||||| ||| || || || ||||||| ||||||||| || | Sbjct 2381 CCTTGACATTCTCAATAGTGTCGGAAGCCTCAACCTCGAGGGTAATCGTCTTTCCAGTAA 2440 Query 195119 AAGTTTTTACGAACACTTGCATT 195141 ||||||||||| | ||||||| Sbjct 2441 GCGTTTTTACGAAGATTTGCATT 2463 Score = 107 bits (118), Expect = 4e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || ||| || ||||| | ||| || || |||||||| || ||||| ||||| || || || Sbjct 367 CTCACCAGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTT 426 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| |||||||| || ||| ||||||||||| | ||||| || || Sbjct 427 GGCCTTGACGTTCTCGATGGTGTCGGATGCTTCGACTTCAAGGGTGATGGTCTTCCCAGT 486 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||| || ||||| | |||||| Sbjct 487 AAGAGTCTTGACGAAGATTTGCAT 510 Score = 102 bits (112), Expect = 2e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||| || |||||| || || ||||| || || ||||||||||| ||||| ||||| || | Sbjct 2010 GCTACTAACCTGCAAAAATGAGTCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGA 2069 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || |||||| || || || ||||| || ||| |||||||| || | ||||| | Sbjct 2070 TCTTAGCCTTGACATTTTCGATTGTGTCGGATGCTTCGACTTCAAGTGTGATAGTCTTGC 2129 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || | ||||||||||| | |||||| Sbjct 2130 CGGTGAGTGTTTTTACGAAAATCTGCATT 2158 Score = 91.5 bits (100), Expect = 3e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 194994 CTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053 || |||||| || ||||| | ||| || || ||||||||||| ||||| || || || || Sbjct 1382 CTACTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGGAT 1441 Query 195054 TTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113 || || || |||||||| || || || ||| ||||| ||||| | ||||| || Sbjct 1442 CTTAGCTTTCACATTCTCAATTGTATCGGATGCTTCAACTTCCAGGGTGATGGTCTTCCC 1501 Query 195114 TGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| ||| || ||||| | |||||| Sbjct 1502 AGTCAGAGTCTTCACGAAGATCTGCATT 1529 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || ||| || ||||| | ||| || || ||||||||||| || ||||||||||| || || Sbjct 1679 CTCACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATCTT 1738 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || || ||||| ||| ||| ||||| | || | ||||| || || Sbjct 1739 GGCCTTCACATTTTCGATTGTGTCAGAAGCTTCGACTTCCAATGTGATAGTCTTGCCGGT 1798 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | ||||||||| || | |||||| Sbjct 1799 AAGAGTTTTTACAAAGATCTGCATT 1823 >seq67160 Length=966 Score = 134 bits (148), Expect = 3e-26 Identities = 104/124 (84%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 194994 CTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053 ||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct 294 CTGCTTACCTGCGAAGATAAGTCGTTGCTGATCTGGAGGGATGCCTTCTTTGTCTTGAAT 235 Query 195054 TTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113 ||| |||||| || || ||||| || ||| ||| ||||| || || | ||||| || Sbjct 234 TTTAGCCTTGACATTTTCGATGGTATCAGAAGCTTCTACTTCCAGAGTGATGGTCTTCCC 175 Query 195114 TGTC 195117 |||| Sbjct 174 TGTC 171 Score = 120 bits (132), Expect = 7e-22 Identities = 117/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || || |||||| || ||||| |||| || || ||||| || ||||||||||||||||| Sbjct 604 GAACTACTTACCGGCAAAGATGAGTCTCTGCTGATCTGGTGGGATGCCTTCTTTGTCTTG 545 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || ||| |||||| || ||||| ||||||||| || |||||||| || | ||||| Sbjct 544 GATCTTTGCCTTGACATTTTCAATAGTGTCCGAAGCCTCGACTTCAAGCGTGATGGTCTT 485 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| || || || || || || | ||||||| Sbjct 484 TCCAGTTAAGGTCTTGACAAAGATTTGCATT 454 >seq120499 Length=638 Score = 129 bits (142), Expect = 1e-24 Identities = 115/144 (80%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || ||||| | ||| || || ||||||||||| ||||| |||||||| || || Sbjct 292 CTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTT 351 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| |||||||||||| ||| ||||||||||||| ||||| || || Sbjct 352 GGCCTTGACGTTCTCGATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTCTTCCCGGT 411 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | |||||| Sbjct 412 AAGGGTCTTCACGAAAATTTGCAT 435 Score = 105 bits (116), Expect = 1e-17 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 195008 AGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGT 195067 |||| | |||||| || ||||| ||||| ||||| ||||| ||||| || |||||||| Sbjct 1 AGATCAATCGTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGAATCTTGGCCTTGACGT 60 Query 195068 TCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTA 195127 ||||||||||||| || ||| |||||||| || | ||||| || || | || || | Sbjct 61 TCTCAATGGTGTCGGATGCTTCGACTTCAAGAGTGATAGTCTTCCCGGTAAGGGTCTTGA 120 Query 195128 CGAACACTTGCAT 195140 |||| | |||||| Sbjct 121 CGAAAATTTGCAT 133 >seq91314 Length=789 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || ||| || || || | ||| || || ||||| || || ||||| ||||| || || || Sbjct 162 CTCACCAGCAAAAATCAATCGCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATCTT 221 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| |||||||| || ||| ||||| || || | ||||| || || Sbjct 222 AGCCTTGACGTTCTCGATGGTGTCAGATGCTTCGACTTCCAGTGTGATGGTCTTCCCAGT 281 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 |||||| || || || | ||||| Sbjct 282 CAAAGTCTTCACAAAAATCTGCAT 305 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||| |||||| | |||||| ||||||||||| || || |||||||| | || || | Sbjct 610 GAGTCGCAAAACCAAGTGAAGTGTGGACTCTTTCTGGATGTTGTAATCCGAGAGTGTGCG 669 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGT 195025 ||||| || |||||||| ||||| || |||| | | |||||| Sbjct 670 GCCATCCTCAAGCTGCTTTCCTGCAAAAATAATTTTTAGTTGGT 713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1107285218564403