Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_016562.1 Length=132662 Score E Sequences producing significant alignments: (Bits) Value seq11541 107 2e-18 >seq11541 Length=2193 Score = 107 bits (118), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 40631 TTAACAAAATTCTCTCTACCAAATATCTCATCCATAAGTACTTTTAAATACGCTTGCTCG 40690 |||| | |||||||||| ||||| || |||||||| || ||||| ||||| | || Sbjct 1481 TTAATATAATTCTCTCTTCCAAAAATATCATCCATTAGAACTTTCAAATAGGAAACTTCA 1540 Query 40691 TTATCATCACATTGAACGAATATAACACCATCATCTTTTAAAAATTCTCTAGCTACTTCT 40750 |||| ||| | | ||| ||||||| ||||||||| | |||||| |||| |||||| Sbjct 1541 TTATAATCCAACTCAACAAATATAAGACCATCATCACGCATTAATTCTTTAGCAACTTCT 1600 Query 40751 AATCTTTCTTTCATAAATTTTAACCAA 40777 ||||| | |||||||| |||||||| Sbjct 1601 AATCTATTCTTCATAAAAGTTAACCAA 1627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423594433562827