Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_018846.1 Length=60894 Score E Sequences producing significant alignments: (Bits) Value seq17020 351 4e-92 >seq17020 Length=1896 Score = 351 bits (388), Expect = 4e-92 Identities = 225/244 (92%), Gaps = 1/244 (0%) Strand=Plus/Plus Query 5877 CGATCTTTGGTAAAAGTGGTCATAGCTATTTCACCTTAATCTCAACATTTCGCAGCTTTA 5936 || |||||||||| || |||| |||||||||||||||||||||||||||||||||||| Sbjct 1355 CGTTCTTTGGTAATAGAATTCAT-GCTATTTCACCTTAATCTCAACATTTCGCAGCTTTA 1413 Query 5937 GCTCTACTGGCAGGTCTGACTTTCCTGTTAATGCTAATGCGAGATTTTCTGGAGTAGTGA 5996 ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct 1414 ACTCTATTGGTAGGTCTGACTTTCCTGTTAATGCTAATGCGAGATTTTCAGGAGTAATGA 1473 Query 5997 GAACAGTTATTGTTTTCCCCCTCGCCAGACGAATAATCATGTGTATCTCGCTATCGTCAC 6056 || |||||||||||||| || ||||||||||||||||||| |||| |||| |||||||| Sbjct 1474 GAGCAGTTATTGTTTTCTCCATCGCCAGACGAATAATCATTCGTATTTCGCGATCGTCAC 1533 Query 6057 ATGCTCCTGGTCGAACAATTGAGATTTGTCCGTTCATCTCACTCTCCTTTGATGCGAATG 6116 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1534 ATGCTCCTGGTCGAACAATTGATATTTGTCCGTTCATCTCACTCTCCTTTGATGCGAATG 1593 Query 6117 CCAG 6120 |||| Sbjct 1594 CCAG 1597 Score = 125 bits (138), Expect = 3e-24 Identities = 100/117 (85%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 60452 GGATTCCTCCCTTGCAGAGGTCTTTCTTCGTTATCAGTGCCGTCACAATGACGGTAATAC 60511 |||||| | ||| ||||||||||||| |||||| |||||||||||| |||||||| | || Sbjct 504 GGATTCGTACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACTATGACGGTTAAAC 563 Query 60512 AGA-GATGAGCAGGGTGATTAACATCGCCTTTTGCTGCTTTCATTGCAT--TTCTCC 60565 ||| || || ||||| |||||||||||||||||||||| ||||| || | |||||| Sbjct 564 AGATGACGATCAGGGCGATTAACATCGCCTTTTGCTGC-TTCATAGCCTGCTTCTCC 619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194381893611248