Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_019721.1 Length=40029 Score E Sequences producing significant alignments: (Bits) Value seq10918 100 7e-17 seq827 96.9 9e-16 >seq10918 Length=2235 Score = 100 bits (110), Expect = 7e-17 Identities = 104/136 (76%), Gaps = 3/136 (2%) Strand=Plus/Minus Query 32834 TGTGCAGAGCGCATCACGATGAGTTGCACGCTGATCCTGTGGCATTTGAAGCGAAGCACG 32893 |||||||| ||||||| | ||| |||| | ||| | ||||||||||||| |||| | | Sbjct 2233 TGTGCAGAAAGCATCACAACGAGCTGCATACGGATACAGTGGCATTTGAAGAGAAGTATG 2174 Query 32894 GCGACCAGTTAACGCTGTTGTTTCGGTTTTTAGATCGTGCGCTGGCAATTGGCGTATTAG 32953 || ||| | |||| | ||||| ||| | ||||| |||||||||||||||||| | | Sbjct 2173 GCTCCCAACTGGAGCTGATATTTCGTTTTATCGATCGCGCGCTGGCAATTGGCGTACTGG 2114 Query 32954 CATGAAAAGTGGAGAA 32969 | | |||||||||| Sbjct 2113 CGT---AAGTGGAGAA 2101 >seq827 Length=4560 Score = 96.9 bits (106), Expect = 9e-16 Identities = 84/100 (84%), Gaps = 6/100 (6%) Strand=Plus/Minus Query 21505 GCTGTGTGGGTTCAAGTCCCACTCCGGGTACCATGGGAAA-ACTAGAATAAAATCAATG- 21562 |||||| ||||||||||||| ||||||||||||||||||| | ||||| |||||| | Sbjct 4560 GCTGTGCGGGTTCAAGTCCCGCTCCGGGTACCATGGGAAACATCAGAAT--AATCAAAGC 4503 Query 21563 -ATAAGCAGTGTCGTATAAACCACCGAAAGGTGGTTTTTT 21601 |||||||||||||| |||||||| ||||||||||| Sbjct 4502 AATAAGCAGTGTCGT-GAAACCACCTCCGGGTGGTTTTTT 4464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127736399162078