Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq16225 167 3e-36 seq7565 152 7e-32 seq120499 132 6e-26 seq3302 129 8e-25 seq67160 123 3e-23 seq91314 114 2e-20 >seq16225 Length=1931 Score = 167 bits (184), Expect = 3e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 195620 AAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCG 195679 || || |||||||| |||||||| || | ||||| ||| ||||||||||| | ||| Sbjct 1520 AAGCAGTTTGCTCCGGAAGAAATCTCTGCGATGGTTCTGACGAAGATGAAGGAAATTGCT 1579 Query 195680 GAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGT 195739 ||||| | | || || || || |||||||||||||||| ||||||||||||| Sbjct 1580 GAATCATATCTTGGAAAGGAAGTCAAGAATGCAGTTGTGACTGTGCCTGCTTACTTCAAC 1639 Query 195740 GATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGA 195799 || | || |||||||| || ||||| |||| | || || |||||||| | || || Sbjct 1640 GACGCTCAGCGACAGGCCACGAAGGATGCTGGAACAATCGCTGGTCTAAATGTTGTTCGA 1699 Query 195800 ATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 || || |||||||| ||||| || || |||||||||||||| |||||||| Sbjct 1700 ATCATAAATGAACCTACAGCAGCAGCCATTGCTTATGGTCTCGACAAGAA 1749 >seq7565 Length=2537 Score = 152 bits (168), Expect = 7e-32 Identities = 119/142 (84%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || ||||| ||||||||||| || || ||||||||||||||| | || Sbjct 2462 ATGCAAATCTTCGTAAAAACGCTTACTGGAAAGACGATTACCCTCGAGGTTGAGGCTTCC 2403 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||||||||| || || |||||||| ||||||||| Sbjct 2402 GACACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAAGAGGGCATTCCTCCCGATCAG 2343 Query 171982 CAACGACTTATTTTTGCTGGTA 172003 ||||| || || ||||| |||| Sbjct 2342 CAACGTCTGATCTTTGCAGGTA 2321 Score = 127 bits (140), Expect = 3e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || ||||| || || |||||||| | || || || | || Sbjct 816 ATGCAGATCTTTGTGAAGACTCTTACGGGCAAGACTATCACATTGGAAGTCGAAGCATCC 757 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | |||||||||||||| ||||||||||| ||||| || |||||| Sbjct 756 GATACCATTGAAAATGTGAAAGCCAAGATTCAGGATAAGGAAGGAATTCCTCCAGATCAG 697 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 ||||| | |||||||||||||| Sbjct 696 CAACGTTTGATTTTTGCTGGTAA 674 Score = 123 bits (136), Expect = 3e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || |||||||| || || |||||||| || || || | || Sbjct 510 ATGCAAATCTTCGTCAAGACTCTTACTGGGAAGACCATCACCCTTGAAGTCGAAGCATCC 451 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||| || || |||||||| || || || |||||| Sbjct 450 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCAGATCAG 391 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || ||| | || ||||||||| Sbjct 390 CAGCGATTGATCTTTGCTGGT 370 Score = 123 bits (136), Expect = 3e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || ||||| || || |||||||| || ||||| | || Sbjct 1528 ATGCAGATCTTCGTGAAGACTCTGACTGGGAAGACCATCACCCTGGAAGTTGAAGCATCC 1469 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || ||||| || || | ||||| ||||| || ||||||||||| ||||| || |||||| Sbjct 1468 GATACAATTGAGAATGTGAAAGCTAAGATCCAGGATAAGGAAGGAATTCCTCCAGATCAG 1409 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || ||| | || ||||||||||| Sbjct 1408 CAGCGATTGATCTTTGCTGGTAA 1386 Score = 114 bits (126), Expect = 2e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||| ||||| ||||| || || |||||||| | || || || | || Sbjct 1822 ATGCAGATCTTTGTAAAAACTCTTACCGGCAAGACTATCACATTGGAAGTCGAAGCTTCT 1763 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || | || |||||||| ||||| || || || ||||| || |||||| Sbjct 1762 GACACAATCGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCAGATCAG 1703 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || ||| | || ||||||||| Sbjct 1702 CAGCGATTGATCTTTGCTGGT 1682 Score = 114 bits (126), Expect = 2e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || ||||| || || || || |||||||| || || || || | || Sbjct 2157 ATGCAGATTTTCGTAAAAACACTCACCGGCAAGACTATCACACTTGAAGTCGAAGCATCC 2098 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || |||| || ||||| || || |||||||| ||||| || |||||| Sbjct 2097 GACACAATCGAAAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCTCCAGATCAG 2038 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || ||||| |||||||| ||| Sbjct 2037 CAGCGACTCATTTTTGCAGGT 2017 >seq120499 Length=638 Score = 132 bits (146), Expect = 6e-26 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || ||||| |||||||| || || || || ||||| || || || | || Sbjct 435 ATGCAAATTTTCGTGAAGACCCTTACCGGGAAGACCATTACCCTTGAAGTCGAAGCTTCG 376 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||| ||||| |||||||| ||||| || |||||| Sbjct 375 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCTCCAGATCAG 316 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || ||| | || ||||||||||| Sbjct 315 CAGCGATTGATCTTTGCTGGTAA 293 Score = 114 bits (126), Expect = 2e-20 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || || |||||||| || || |||||||| || || || || | || Sbjct 133 ATGCAAATTTTCGTCAAGACCCTTACCGGGAAGACTATCACTCTTGAAGTCGAAGCATCC 74 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| ||||||||||| || |||||||| ||||| || |||||| Sbjct 73 GACACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAGGAAGGAATTCCCCCAGATCAG 14 Query 171982 CAACGA 171987 |||||| Sbjct 13 CAACGA 8 >seq3302 Length=3241 Score = 129 bits (142), Expect = 8e-25 Identities = 304/454 (67%), Gaps = 4/454 (1%) Strand=Plus/Minus Query 195887 GGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAG 195946 ||||| ||||| || |||||||| | || | || |||| ||| || ||||||||||| Sbjct 1713 GGTGGCGGTACCTTCGATGTCTCCATCCTGACCATCGAAGATGGAATCTTCGAAGTAAAA 1654 Query 195947 GCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA- 196005 | || ||||| || || ||||| || || ||||| ||||| || | || || Sbjct 1653 TCCACCGCTGGAGACACCCATCTCGGAGGAGAAGACTTCGACAACCGAATGGTCAACCAC 1594 Query 196006 TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCT 196065 |||||| | || ||| |||||| | ||||| ||| | ||||| | ||||| Sbjct 1593 TTTGTC-GCCGAATTCAAGCGAAAGCACAAGAAGGATCTCAACACCAATCCCCGTGCTCT 1535 Query 196066 TCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAAC 196125 ||| || || | || || || ||||| || || || || || || || | | || | Sbjct 1534 TCGACGTCTCCGCACAGCCTGCGAACGCGCAAAGCGTACCCTGTCATCGTCATCCCAGGC 1475 Query 196126 AATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGC 196185 | || || || || |||| || ||||||||||||||||| | || || ||||| Sbjct 1474 TTCCATCGAAATCGACTCACTGTTCGAGGGAATTGACTTCTATACTAACATCACTCGTGC 1415 Query 196186 ACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGT 196245 ||||| |||||| | | | ||| | || | ||||| || | || | |||| Sbjct 1414 CCGTTTCGAAGAGCTGTGCGCGGATCTCTTCCGTTCCACCATGGACCCCG-TGGAGAAGT 1356 Query 196246 -ACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGAT 196304 || | ||||| |||||||| ||| || | | || || || || || ||||| | Sbjct 1355 CGCTAAGAGACGCCAAGATGGACAAGAGCCAGATCCACGACATCGTACTCGTCGGAGGTT 1296 Query 196305 CAACCCGTATTCCGAAGATTCAACAGATGCTTTC 196338 | |||||||| |||||| | || || |||| || Sbjct 1295 CCACCCGTATCCCGAAGGTCCAGAAGTTGCTGTC 1262 Score = 102 bits (112), Expect = 1e-16 Identities = 183/263 (70%), Gaps = 6/263 (2%) Strand=Plus/Minus Query 196448 GTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGT 196507 ||||||||||| || || || ||||| || || | || || ||| |||| || || || Sbjct 1159 GTCCAAGATCTGCTACTTCTGGATGTGGCTCCTCTTTCGCTTGGTATTGAGACCGCTGGA 1100 Query 196508 GGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGA--AGGAACAAG 196565 ||||| ||||| | || | |||||||| || || || || |||| || | | | Sbjct 1099 GGTGTGATGACCGCGCTGATCAAGAGGAACACGACCATCCCAACGAAGACCAGTCAGACG 1040 Query 196566 TCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAAC 196625 || | ||||| ||||| || || || ||||| | || || |||| |||||||| | Sbjct 1039 --TTCACCACGTACTCCGACAACCAGCCTGGTGTACTCATCCAGGTATTCGAAGGAGAGC 982 Query 196626 GCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCT 196684 | | | || | ||||||||| | | ||||||| ||||| | | || |||||| | Sbjct 981 G-TGCTATGACCAAGGATAACAACTTGCTTGGAAAGTTCGAGCTCTCCGGAATTCCACCA 923 Query 196685 GCACCCAGAGGTGTTCCACAGAT 196707 ||||| |||| || || ||||| Sbjct 922 GCACCTCGAGGAGTACCCCAGAT 900 >seq67160 Length=966 Score = 123 bits (136), Expect = 3e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || ||| | |||||||| || ||||| || || || ||| | || Sbjct 455 ATGCAAATCTTTGTCAAGACCTTAACTGGAAAGACCATCACGCTTGAAGTCGAGGCTTCG 514 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| || ||||| ||||| || |||||||| ||||| |||||| Sbjct 515 GACACTATTGAAAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCACCAGATCAG 574 Query 171982 CAACGACTTATTTTTGCTGGTAA 172004 || |||| || ||||| ||||| Sbjct 575 CAGAGACTCATCTTTGCCGGTAA 597 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/129 (77%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || ||||| || || || || | || || || ||||| || |||| || Sbjct 172 ACAGGGAAGACCATCACTCTGGAAGTAGAAGCTTCTGATACCATCGAAAATGTCAAGGCT 231 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 || |||||||| || |||||||| || || ||||||||||||||||| || || ||||| Sbjct 232 AAAATTCAAGACAAAGAAGGCATCCCTCCAGATCAGCAACGACTTATCTTCGCAGGTAAG 291 Query 172006 CA-GCTTGA 172013 || |||||| Sbjct 292 CAGGCTTGA 300 >seq91314 Length=789 Score = 114 bits (126), Expect = 2e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| ||||| || ||||| || || || ||||| | || || || Sbjct 605 GTGGTATGCAGATCTTCGTGAAGACACTTACGGGCAAGACAATCACATTGGAAGTCGAAG 546 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || || || || | ||||||||||| || ||||||||||| ||||| || | Sbjct 545 CATCCGATACGATTGAAAATGTGAAAGCCAAGATCCAGGATAAGGAAGGAATTCCGCCAG 486 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAA 172004 ||||||| ||| | || ||||||||||| Sbjct 485 ATCAGCAGCGATTGATCTTTGCTGGTAA 458 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || |||||||| || | ||||| || || ||||| || || || || | || Sbjct 305 ATGCAGATTTTTGTGAAGACTTTGACTGGGAAGACCATCACACTGGAAGTCGAAGCATCT 246 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| || ||||| || || |||||||| || || || |||||| Sbjct 245 GACACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCAG 186 Query 171982 CAACGACTTATTTTTGCTGGT 172002 || ||| | |||||||||||| Sbjct 185 CAGCGATTGATTTTTGCTGGT 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656591829230480