Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq7565 109 1e-18 >seq7565 Length=2537 Score = 109 bits (120), Expect = 1e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 192313 CCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAAT 192372 ||||||||||| | ||||| || | || | ||| || ||||| ||||| || ||| Sbjct 3 CCTCTAAGACGAAGGACTAAGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACAAT 62 Query 192373 GTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATT 192432 || || |||| || | || || || ||||| || |||| ||| || || || || ||| Sbjct 63 GTGCGACCATCCTCGAGCTGCTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAATT 122 Query 192433 CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCT 192492 |||||||| ||||| || || || ||||| || | |||||| | || ||||| Sbjct 123 CCTTCTTTGTCTTGGATCTTCGCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTTCC 182 Query 192493 AGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || || || || || || || ||||| | || ||||||||| Sbjct 183 AGGGTTATCGTCTTTCCCGTCAACGTTTTGACGAAAATCTGCATT 227 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 192394 TTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 192453 |||||||||||||| |||| ||| ||||| || || |||||||| ||||| || || ||| Sbjct 1386 TTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGGATCTTA 1445 Query 192454 TTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 192513 ||| ||||| || | ||| || | ||| ||||| || || ||||| || ||||| Sbjct 1446 GCTTTCACATTCTCAATTGTATCGGATGCTTCAACTTCCAGGGTGATGGTCTTCCCAGTC 1505 Query 192514 AATGTTTTAATAAATATCTGCATT 192537 | || || | || ||||||||| Sbjct 1506 AGAGTCTTCACGAAGATCTGCATT 1529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982531077552150