Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq88766 778 0.0 seq10918 187 6e-43 >seq88766 Length=805 Score = 778 bits (862), Expect = 0.0 Identities = 573/666 (86%), Gaps = 1/666 (0%) Strand=Plus/Plus Query 18571 TGAATCGCCACAGATAATCTAGACACTTCCGAGCCGCTGATAATATTGGTTTTCGTATTC 18630 || ||||||| |||||||||||||||| |||||| |||||||| |||||||||||||| Sbjct 141 TGTATCGCCATGAATAATCTAGACACTTCAGAGCCGTTGATAATACTGGTTTTCGTATTC 200 Query 18631 AGTTGGTGGCATATGATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTCGAT 18690 || |||| ||| ||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct 201 TGTCGGTGACATCTGATCGCTAGAACCACGCCGACGCTTACTGTTATAAAACATTTCGAT 260 Query 18691 GTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTTCTTTATCCG 18750 || |||||||||||| | ||| | |||||| ||||||||||||||||||||||||||||| Sbjct 261 GTTATCAAAAATATCGCTGCGGGATTCTTCCCGCGTTCCGTAGATCTTTTTCTTTATCCG 320 Query 18751 TTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGTTACCGCG 18810 |||||| ||||| | ||||||||| ||||||||||| || ||||||||||||| | |||| Sbjct 321 TTCACGCTTCAGCAACTGGAAAAAGCTTTCTGCGACAGCATTGTCATGACAGTGATCGCG 380 Query 18811 ACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGACTGCCACTCATAGCTTGT 18870 ||||||||| ||||||||| |||||| |||||||||| ||||||||||||| ||| || Sbjct 381 ACGGCTCATGCTGCCCTCCGTGCCGTGTAATTTCAGGAAAGACTGCCACTCATGGCTCGT 440 Query 18871 GTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCCACAC 18930 |||||||||||| ||||| || |||| || ||||| ||||| |||||||| ||||| || Sbjct 441 GTACTGACTGCCCTGATCCGAGTGAATCAATACCTGTTTTTGGGGATTACGCCGCCATAC 500 Query 18931 GGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACCAGCC 18990 |||||| | | ||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 501 AGCCATCTGCAATGCATTCAGGACAATGTCCTTTGTCATCCGGGATTGCATTGACCAGCC 560 Query 18991 AATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACAGCCAGCCTTCGTGAGT 19050 |||| ||||| |||||||| ||||||||||| || |||||||||||||||||||| || Sbjct 561 GATAATTTTGCATGAGAACAGATCAACAACCACGGCAAGATACAGCCAGCCTTCGTGGGT 620 Query 19051 CCGGATGTAGGTGATGTCCGTTACCCAACGCTCATCCGGTGCTTCCGAGTTGAACTGCCG 19110 || |||||| || ||||||||||||||||||||| |||| | ||| ||||||| || Sbjct 621 CCTGATGTAAGTTATGTCCGTTACCCAACGCTCACCCGGAGTATCCAGATTGAACTATCG 680 Query 19111 CTGGAGCCTGTTGGGCGTCACGATGCTGGTTTCACCCTTACGTGCCCGTGGGCTACGGTA 19170 || |||| ||||||||| ||| || || | |||||| || ||||| || ||||| ||||| Sbjct 681 CTAGAGCTTGTTGGGCGACACTATACTAGCTTCACCTTTGCGTGCTCGCGGGCTCCGGTA 740 Query 19171 CCCGACCTGAGCCCTTATCCCGGCACGCTTCATCAGTCGCCAGACACGGTTAACTCCGCA 19230 |||||||||||| |||||||| |||||||||||||||| ||||| | ||| |||||||| Sbjct 741 TCCGACCTGAGCCTTTATCCCGACACGCTTCATCAGTCG-CAGACTCTGTTCACTCCGCA 799 Query 19231 CTGTTG 19236 || ||| Sbjct 800 CTCTTG 805 >seq10918 Length=2235 Score = 187 bits (206), Expect = 6e-43 Identities = 125/139 (90%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 34442 TTTGTGCAGAAAGCATCACGACGAGCTGCATGCGGATACCGTGGCATTTGAAGAGAAGTA 34501 ||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| Sbjct 2235 TTTGTGCAGAAAGCATCACAACGAGCTGCATACGGATACAGTGGCATTTGAAGAGAAGTA 2176 Query 34502 TGGCTCTCAGCTGGAGCTGATATTTCGTTTTATCGATCGTGCGCTGGCAACTGGCGTGCT 34561 |||||| || ||||||||||||||||||||||||||||| |||||||||| |||||| || Sbjct 2175 TGGCTCCCAACTGGAGCTGATATTTCGTTTTATCGATCGCGCGCTGGCAATTGGCGTACT 2116 Query 34562 GGCCTGATTTTGTGGAGAA 34580 ||| | | |||||||| Sbjct 2115 GGCGTAA----GTGGAGAA 2101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126870790295760