Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq7565 87.8 2e-12 >seq7565 Length=2537 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 137186 CTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCA 137245 |||||| | ||| | ||||| || | || || || || || || ||||||||| || Sbjct 1 CTCCTCTAAGACGAAGGACTAAGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACA 60 Query 137246 TTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTA 137305 ||||| || ||||| || || || ||| | |||| || ||||| || || || | Sbjct 61 ATGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAA 120 Query 137306 TGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTT 137365 | ||||||||||| || || || | | ||| | || |||| || || |||| Sbjct 121 TTCCTTCTTTGTCTTGGATCTTCGCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTT 180 Query 137366 CAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | | || | |||||| || ||||| ||||| ||||| || ||||| Sbjct 181 CCAGGGTTATCGTCTTTCCCGTCAACGTTTTGACGAAAATCTGCAT 226 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 137270 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 137329 |||| ||| ||||||||||||||||||||||||| ||||| |||||||| ||| || Sbjct 2321 TACCTGCAAAGATCAGACGTTGCTGATCGGGAGGAATGCCCTCTTTGTCTTGAATCTTGG 2380 Query 137330 GTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 137389 || | | || | ||||| | | || || || | || | |||||| || || | Sbjct 2381 CCTTGACATTCTCAATAGTGTCGGAAGCCTCAACCTCGAGGGTAATCGTCTTTCCAGTAA 2440 Query 137390 ATGTTTTTACGAATATTTGCAT 137411 ||||||||||| |||||||| Sbjct 2441 GCGTTTTTACGAAGATTTGCAT 2462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487600444438800