Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq7565 127 2e-24 >seq7565 Length=2537 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| |||||||||||| || ||| ||| | |||||||| Sbjct 21 AAGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACAATGTGCGACCA-TCCTCGAG 79 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || |||| | ||||||||||| || || || ||||| ||||| ||| Sbjct 80 CTGCTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGGAT 139 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| || || | || |||||| || | ||| | || || || Sbjct 140 CTTCGCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGTCTTTCC 199 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||||||||| Sbjct 200 CGTCAACGTTTTGACGAAAATCTGCAT 226 Score = 96.9 bits (106), Expect = 3e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 ||||||| |||||||| || ||||| || ||||||||||| |||||| ||||| | Sbjct 2025 AAATGAGTCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTGACAT 2084 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||||| | || || || | |||| || |||||||| || ||||||| Sbjct 2085 TTTCGATTGTGTCGGATGCTTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTTTTTA 2144 Query 133648 CGAAAATCTGCAT 133660 ||||||||||||| Sbjct 2145 CGAAAATCTGCAT 2157 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 133536 CGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACC 133595 |||||||| || |||||||| ||||||||||| |||||| ||||| | ||| | Sbjct 386 CGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATG 445 Query 133596 GTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATC 133655 ||||||| | || || || | ||||| ||| || || || ||||| || ||||| || Sbjct 446 GTGTCGGATGCTTCGACTTCAAGGGTGATGGTCTTCCCAGTAAGAGTCTTGACGAAGATT 505 Query 133656 TGCATG 133661 |||||| Sbjct 506 TGCATG 511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482487139195160