Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7565 102 5e-17 >seq7565 Length=2537 Score = 102 bits (112), Expect = 5e-17 Identities = 159/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 33526 CCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGT 33585 ||||| | ||| | || || || || || ||| || || || ||||||||||| | | Sbjct 3 CCTCTAAGACGAAGGACTAAGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACAAT 62 Query 33586 GTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACA 33645 ||||| | || || | || || |||||||||||||| |||||||| ||| | || | Sbjct 63 GTGCGACCATCCTCGAGCTGCTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAATT 122 Query 33646 CCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTC 33704 ||||||||||| || ||| ||| |||| || | ||| || | ||||| || Sbjct 123 CCTTCTTTGTCTTGGATCTTCGCCTTC-ACATTTTCAATGGTATCTGAGGCCTCCACTTC 181 Query 33705 AACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || ||||| || || || |||||||| || || |||||||| Sbjct 182 CAGGGTTATCGTCTTTCCCGTCAACGTTTTGACGAAAATCTGCAT 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328085024585280