Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq17020 228 3e-55 >seq17020 Length=1896 Score = 228 bits (252), Expect = 3e-55 Identities = 192/236 (81%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 13056 CAGTGGCGCTATATTCGACTCAGGTTATGGTTTATTCCCGTCTGATCAGGCGCGTAAGGA 13115 |||||| | | | | | | ||||| || || |||||||||||||| ||||||||||| || Sbjct 1895 CAGTGGTGATGTTTACAATTCAGGCTACGGATTATTCCCGTCTGAGCAGGCGCGTAAAGA 1836 Query 13116 CTGGCAAAATGCCCGCAAAAAACTCTCGAGAGCAAAGGCAAAGAAACCGGTTGTTATTGA 13175 ||||||||| |||||||||||||| || || ||||||| |||||||||||||| |||| Sbjct 1835 CTGGCAAAACGCCCGCAAAAAACTATCAAGGGCAAAGGTGAAGAAACCGGTTGTGGTTGA 1776 Query 13176 CCCTGGTCTTATCCGGGCATTACCTGATGGGGAAATCCGGCGCTACGACAGACGCTACAA 13235 |||| |||||| || |||||| || || ||||| || || ||| ||||||| | || Sbjct 1775 TCCTGAGCTTATCTGGTAATTACCAGACGGAGAAATACGTCGTTACAACAGACGACAGAA 1716 Query 13236 CATAATTTGTCGCGAGTGCCGTAACAGCGAAACGATGCAGCGTGTGCTGGCATTCT 13291 |||||| |||||||||||||| || |||||| | |||| |||||| ||||| |||| Sbjct 1715 CATAATCTGTCGCGAGTGCCGGAAGAGCGAAGCTATGCGGCGTGTACTGGCTTTCT 1660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200134420176340