Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq17020 170 1e-37 >seq17020 Length=1896 Score = 170 bits (188), Expect = 1e-37 Identities = 171/220 (78%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 75130 CGTTCTTTGGTAAGAATACTCATATCTATTTCACCTTAATCTCAACATTTCTCACATCTA 75189 ||||||||||||| | | |||| |||||||||||||||||||||||||| || | || Sbjct 1355 CGTTCTTTGGTAATAGAATTCATG-CTATTTCACCTTAATCTCAACATTTCGCAGCTTTA 1413 Query 75190 GCTCTACGGGGAGTTCTGCCTTTCCAGTCAGTGCTAATGCAAGATTTTCTGGAGTAATAA 75249 ||||| || || |||| |||||| || | ||||||||| |||||||| |||||||| | Sbjct 1414 ACTCTATTGGTAGGTCTGACTTTCCTGTTAATGCTAATGCGAGATTTTCAGGAGTAATGA 1473 Query 75250 TGACAGTTATTGTTTTTCCTCTCTCCAGACGAATAGCCATTCTTATCTTGTCATCATCAT 75309 ||||||||||||| | || ||||||||||| ||||| || | || ||| | Sbjct 1474 GAGCAGTTATTGTTTTCTCCATCGCCAGACGAATAATCATTCGTA---TTTCGCGATCGT 1530 Query 75310 CACCTGTGTTAGGTCGAGTAATTGATATTTGTCCGTTCAT 75349 ||| || |||||| ||||||||||||||||||||| Sbjct 1531 CACATGCTCCTGGTCGAACAATTGATATTTGTCCGTTCAT 1570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386148280639951