Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq7565 122 9e-23 seq120499 91.5 1e-13 seq91314 82.4 8e-11 >seq7565 Length=2537 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134488 CTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAA 134547 ||||||| || || | || | ||| || || || ||||| ||||| ||||| ||| | Sbjct 1 CTCCTCTAAGACGAAGGACTAAGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACA 60 Query 134548 CGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTA 134607 ||| || || |||||||| ||||| ||||||||||| |||||||| || || || | Sbjct 61 ATGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAA 120 Query 134608 TGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGT 134667 | |||||||| ||||| || || || || || | || || || | ||||| | Sbjct 121 TTCCTTCTTTGTCTTGGATCTTCGCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTT 180 Query 134668 CGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || || || || || || || || ||||| |||||||| |||||| Sbjct 181 CCAGGGTTATCGTCTTTCCCGTCAACGTTTTGACGAAAATCTGCATT 227 Score = 102 bits (112), Expect = 8e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 |||||||| |||| ||| ||||||||||| || ||||| ||||| |||||||| || Sbjct 2323 CCTGCAAAGATCAGACGTTGCTGATCGGGAGGAATGCCCTCTTTGTCTTGAATCTTGGCC 2382 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 ||||| || | |||||||| | || || ||||| ||||| || || || || | Sbjct 2383 TTGACATTCTCAATAGTGTCGGAAGCCTCAACCTCGAGGGTAATCGTCTTTCCAGTAAGC 2442 Query 134694 GTTTTAACGAAAATTTGCATT 134714 ||||| ||||| ||||||||| Sbjct 2443 GTTTTTACGAAGATTTGCATT 2463 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 ||||||||||| | ||||||||||| || || || ||||| || || || || || Sbjct 2018 CCTGCAAAAATGAGTCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTTAGCC 2077 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 ||||| || | ||||||||| | ||| || || || || || || || ||||| | Sbjct 2078 TTGACATTTTCGATTGTGTCGGATGCTTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGT 2137 Query 134694 GTTTTAACGAAAATTTGCATT 134714 ||||| |||||||| |||||| Sbjct 2138 GTTTTTACGAAAATCTGCATT 2158 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || ||||| ||||| ||||||||||| || || || ||||| || || || || || Sbjct 371 CCAGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCC 430 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 ||||| || | |||||||| | ||| || || || || ||||| || || || | | Sbjct 431 TTGACGTTCTCGATGGTGTCGGATGCTTCGACTTCAAGGGTGATGGTCTTCCCAGTAAGA 490 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || ||||| |||||||| Sbjct 491 GTCTTGACGAAGATTTGCAT 510 >seq120499 Length=638 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||| ||||||||||| || || || ||||| || ||||| || || Sbjct 293 TTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTTG 352 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || | ||||| || | ||| || || || |||||||| || ||||| Sbjct 353 GCCTTGACGTTCTCGATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTCTTCCCGGTA 412 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || |||||||||||||| Sbjct 413 AGGGTCTTCACGAAAATTTGCAT 435 >seq91314 Length=789 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || ||||||||||| ||||||||||| || || || ||||| || || || || || Sbjct 166 CCAGCAAAAATCAATCGCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATCTTAGCC 225 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 ||||| || | ||||| || | ||| || || || || ||||| || || || ||| Sbjct 226 TTGACGTTCTCGATGGTGTCAGATGCTTCGACTTCCAGTGTGATGGTCTTCCCAGTCAAA 285 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || || ||||| ||||| Sbjct 286 GTCTTCACAAAAATCTGCAT 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504422292482680