Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_027996.1 Length=175720 Score E Sequences producing significant alignments: (Bits) Value seq11541 156 5e-33 >seq11541 Length=2193 Score = 156 bits (172), Expect = 5e-33 Identities = 207/286 (72%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 8038 TAAAAGGTGACAATTTAATTGGCTTACATTCTTTAAAAAAGAAATTTGTGAATAAAGTTA 8097 ||||||| | |||||| | | |||||| | | ||| || ||| ||| ||||||| Sbjct 1763 TAAAAGGAAATAATTTATTAGCTTTACATAGTATTAAATCTAATTTTAGGAAAAAAGTTA 1704 Query 8098 AACTTATCTATATTGACCCACCTTATAATAC---AGGCAATACTAGTTTTAATTATAACG 8154 || | || | ||| ||||| |||| ||| || ||| || | ||||| ||||| | Sbjct 1703 AATTAATTTTTATAGACCCTCCTTTTAACACTGAAGGGGATGAT---TTTAAGTATAATG 1647 Query 8155 ACAAATTTAAACACACTACTTGGCTTACTTTTATGAAAAATCGCCTTGAAATTGCTAGAG 8214 | |||||| ||| |||||||| | ||||||||||| ||| | | ||| |||||| || Sbjct 1646 ATAAATTTTCACATTCTACTTGGTTAACTTTTATGAAGAATAGATTAGAAGTTGCTAAAG 1587 Query 8215 AATTTTTAAGAGATGATGGTGTAATATTCGTTCAATGTGACGATAATGAACAAGCATATT 8274 |||| | | ||||||||| | ||||| ||| | | || |||||||| | |||| Sbjct 1586 AATTAATGCGTGATGATGGTCTTATATTTGTTGAGTTGGATTATAATGAAGTTTCCTATT 1527 Query 8275 TAAAAGTACTTATGGATGAGATATTTGGTAGAGAGAATTTTGTTAA 8320 | ||||| || |||||||| || ||||| |||||||||| | |||| Sbjct 1526 TGAAAGTTCTAATGGATGATATTTTTGGAAGAGAGAATTATATTAA 1481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561090234355200