Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq7565 143 8e-29 seq3302 141 3e-28 seq91314 132 1e-25 seq16225 114 4e-20 seq120499 105 2e-17 seq67160 98.7 3e-15 seq15082 89.7 2e-12 >seq7565 Length=2537 Score = 143 bits (158), Expect = 8e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 140535 TGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGT 140594 || || || ||||| || |||||||| ||||| || ||||| || ||||| || || || Sbjct 24 TGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACAATGTGCGACCATCCTCGAGCTGC 83 Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || ||||| || | || ||||| || || |||||||||||||| || || || || Sbjct 84 TTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGGATCTTC 143 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| ||||| | ||| || | || ||||| || || | |||||||| || Sbjct 144 GCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGTCTTTCCCGTC 203 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 | ||||| || |||||||||||| Sbjct 204 AACGTTTTGACGAAAATCTGCATT 227 Score = 138 bits (152), Expect = 3e-27 Identities = 117/144 (81%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || |||||||| || | |||||||||||| |||||||||||||| ||||||||||| || Sbjct 674 TTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATCTTG 733 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 ||||| ||||| ||||| | ||| |||| ||| ||||| | ||| | ||||| || || Sbjct 734 GCTTTCACATTTTCAATGGTATCGGATGCTTCGACTTCCAATGTGATAGTCTTGCCCGTA 793 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 || || || ||||| ||||||||| Sbjct 794 AGAGTCTTCACAAAGATCTGCATT 817 Score = 138 bits (152), Expect = 3e-27 Identities = 115/141 (82%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || ||||| || || || |||||||| |||||||||||||| || ||||| || ||||| Sbjct 2018 CCTGCAAAAATGAGTCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTTAGCC 2077 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || || | || |||| ||| ||||||||||| | ||||| ||||| ||| Sbjct 2078 TTGACATTTTCGATTGTGTCGGATGCTTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGT 2137 Query 140718 GTTTTTACAAAAATCTGCATT 140738 |||||||| |||||||||||| Sbjct 2138 GTTTTTACGAAAATCTGCATT 2158 Score = 134 bits (148), Expect = 4e-26 Identities = 116/144 (81%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || ||||||||||| | || |||||||| |||||||||||||| |||||||| || ||| Sbjct 1386 TTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGGATCTTA 1445 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 ||||| ||||| ||||| | ||| |||| ||||||||| || || | ||||| || || Sbjct 1446 GCTTTCACATTCTCAATTGTATCGGATGCTTCAACTTCCAGGGTGATGGTCTTCCCAGTC 1505 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 || || || || || ||||||||| Sbjct 1506 AGAGTCTTCACGAAGATCTGCATT 1529 Score = 122 bits (134), Expect = 3e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || |||||||| |||||||||||||| |||||||| || ||||| || ||||| || || Sbjct 2323 CCTGCAAAGATCAGACGTTGCTGATCGGGAGGAATGCCCTCTTTGTCTTGAATCTTGGCC 2382 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| ||||| | || || | ||||| || || |||| |||||||| || || Sbjct 2383 TTGACATTCTCAATAGTGTCGGAAGCCTCAACCTCGAGGGTAATCGTCTTTCCAGTAAGC 2442 Query 140718 GTTTTTACAAAAATCTGCATTA 140739 |||||||| || || ||||||| Sbjct 2443 GTTTTTACGAAGATTTGCATTA 2464 Score = 120 bits (132), Expect = 9e-22 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| | || |||||||| ||||||||||| ||||| || || || || || Sbjct 1683 CCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGGATCTTGGCC 1742 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || || | ||||| | ||| ||||| | ||| | ||||| ||||| || Sbjct 1743 TTCACATTTTCGATTGTGTCAGAAGCTTCGACTTCCAATGTGATAGTCTTGCCGGTAAGA 1802 Query 140718 GTTTTTACAAAAATCTGCATT 140738 ||||||||||| ||||||||| Sbjct 1803 GTTTTTACAAAGATCTGCATT 1823 Score = 95.1 bits (104), Expect = 4e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| | || |||||||| ||||| |||||||| || ||||| || || || Sbjct 371 CCAGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCC 430 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || || | || |||| ||| |||||||| || | ||||| || || || Sbjct 431 TTGACGTTCTCGATGGTGTCGGATGCTTCGACTTCAAGGGTGATGGTCTTCCCAGTAAGA 490 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || || || || ||||| Sbjct 491 GTCTTGACGAAGATTTGCAT 510 Score = 87.8 bits (96), Expect = 5e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||| | || ||||| |||||||| || || ||||| || ||||| | Sbjct 504 TTTGCATGCCACCACGAAGTCGAAGAACCAGATGAAGCGTGGATTCTTTCTGGATATTGT 563 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 | || || || || || |||||||| ||||||||||| | ||| Sbjct 564 AGTCTGACAAAGTGCGGCCATCTTCGAGTTGTTTTCCTGGAAA 606 Score = 87.8 bits (96), Expect = 5e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | || ||||| |||||||| || || |||||||||||||| ||||| Sbjct 1820 CATTCCACCACGGAGTCGAAGAACCAGATGAAGCGTGGATTCTTTTTGAATATTGTAATC 1879 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCC 140599 || ||||| || || ||||| || || ||||| Sbjct 1880 GGACAATGTGCGTCCGTCTTCCAGCTGCTTTCC 1912 Score = 86.0 bits (94), Expect = 2e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | || | ||| | ||||| || |||||||| || || || | Sbjct 1045 TTTGCATACCACCACGGAGTCGCAAAACCAAGTGAAGCGTGGACTCTTTCTGGATGTTGT 1104 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAA 140604 |||| || | ||| || ||||| |||||||||||||| |||| Sbjct 1105 AATCCGAGAGTGTGCGTCCATCCTCAAGTTGTTTTCCTGCAA 1146 >seq3302 Length=3241 Score = 141 bits (156), Expect = 3e-28 Identities = 205/285 (72%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 || ||||| || ||||| || || || || || || |||| ||| || || |||||| Sbjct 2007 GACGCTGTCATCACTGTCCCCGCATACTTCAACGACTCCCAACGTCAAGCTACTAAAGAT 1948 Query 349667 GCTGGCAGC-ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGC 349725 ||||| ||| || | || | ||||| || |||| || || ||||||||||| || || Sbjct 1947 GCTGG-AGCGATCTCAGGAATGAATGTACTTCGAATCATCAACGAACCCACTGCCGCTGC 1889 Query 349726 AATTGCATATGGGCTTGATAAAATGAGTGACCA--AGaaaaaaaTATTCTTATTTTTGAT 349783 || || || || || || |||| || ||| | ||| ||| | || || || ||| Sbjct 1888 TATCGCCTACGGACTCGACAAAA--AGGGACAAGGAGAGCGCAATGTCCTCATCTTCGAT 1831 Query 349784 TTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTT 349843 | ||||| ||||| || ||||| || | ||||| | ||||| ||||| || ||||| Sbjct 1830 CTTGGTGGCGGTACCTTCGATGTCTCCATCCTAACCATCGAAGATGGAATCTTCGAAGTC 1771 Query 349844 AAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 ||| | || ||||| || || |||||||| |||||||| || ||| Sbjct 1770 AAATCCACCGCTGGAGACACCCATCTTGGAGGAGAAGACTTCGAT 1726 >seq91314 Length=789 Score = 132 bits (146), Expect = 1e-25 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || ||||||||||| | || |||||||| || ||||||||||| |||||||| || || Sbjct 458 TTACCAGCAAAGATCAATCGCTGCTGATCTGGCGGAATTCCTTCCTTATCCTGGATCTTG 517 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 ||||| ||||| ||||||| ||| |||| ||| ||||| | ||| | |||||| || || Sbjct 518 GCTTTCACATTTTCAATCGTATCGGATGCTTCGACTTCCAATGTGATTGTCTTGCCCGTA 577 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || || |||||||| Sbjct 578 AGTGTCTTCACGAAGATCTGCAT 600 Score = 104 bits (114), Expect = 7e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 |||||||| || | || |||||||| || || |||||||| || ||||| || ||||| Sbjct 166 CCAGCAAAAATCAATCGCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATCTTAGCC 225 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || || | ||||||| ||| ||||| ||||| | ||||| || || | Sbjct 226 TTGACGTTCTCGATGGTGTCAGATGCTTCGACTTCCAGTGTGATGGTCTTCCCAGTCAAA 285 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || |||||||||||||| Sbjct 286 GTCTTCACAAAAATCTGCAT 305 >seq16225 Length=1931 Score = 114 bits (126), Expect = 4e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 349514 GAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAA 349573 ||| | || || ||| || |||||||| || | |||||| | || ||||||||| Sbjct 1514 GAAGACAAGCAGTTTGCTCCGGAAGAAATCTCTGCGATGGTTCTGACGAAGATGAAGGAA 1573 Query 349574 ATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTAT 349633 ||||||||| ||||| | || | ||| | |||| ||| | ||||| || || || Sbjct 1574 ATTGCTGAATCATATCTTGGAAAGGAAGTCAAGAATGCAGTTGTGACTGTGCCTGCTTAC 1633 Query 349634 TTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTT 349693 || || || || ||||| || || || |||||||| | || || || |||||||| Sbjct 1634 TTCAACGACGCTCAGCGACAGGCCACGAAGGATGCTGGAACAATCGCTGGTCTAAATGTT 1693 Query 349694 CTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAA 349746 | |||| || |||||||| || || ||||| ||||| ||||| || || || Sbjct 1694 GTTCGAATCATAAATGAACCTACAGCAGCAGCCATTGCTTATGGTCTCGACAA 1746 Score = 91.5 bits (100), Expect = 4e-13 Identities = 95/121 (79%), Gaps = 8/121 (7%) Strand=Plus/Plus Query 349295 ACGCCATCATACGTTGCATTTACC---GAAACTG---AGCGTATGATTGGTGATTCTGCA 349348 || || ||||| ||||||||| | |||| || | ||||||||||||||| ||||| Sbjct 1243 ACCCCGTCATATGTTGCATTTTCACAAGAAAATGGTGAACGTATGATTGGTGATGCTGCA 1302 Query 349349 AAAAATCAAGCTG-CTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGG 349407 ||||||||| ||| | ||||| |||| || |||||||||||||||||| | ||||| Sbjct 1303 AAAAATCAA-CTGACCATCAATCCTGAAAACACAGTTTTTGATGCTAAGCGATTAATTGG 1361 Query 349408 T 349408 | Sbjct 1362 T 1362 >seq120499 Length=638 Score = 105 bits (116), Expect = 2e-17 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 140605 AGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACAT 140664 |||| | ||||||||||| || ||||||||||| || |||||||| || || || || | Sbjct 1 AGATCAATCGTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGAATCTTGGCCTTGACGT 60 Query 140665 TATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTA 140724 | ||||| | || |||| ||| |||||||| || | ||||| ||||| || || || | Sbjct 61 TCTCAATGGTGTCGGATGCTTCGACTTCAAGAGTGATAGTCTTCCCGGTAAGGGTCTTGA 120 Query 140725 CAAAAATCTGCAT 140737 | ||||| ||||| Sbjct 121 CGAAAATTTGCAT 133 Score = 105 bits (116), Expect = 2e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || ||||||||||| | || |||||||| |||||||||||||| || || || || || Sbjct 293 TTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTTG 352 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || || || || || | || || | ||| |||||||| |||| ||||| ||||| Sbjct 353 GCCTTGACGTTCTCGATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTCTTCCCGGTA 412 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 || || || || ||||| ||||| Sbjct 413 AGGGTCTTCACGAAAATTTGCAT 435 >seq67160 Length=966 Score = 98.7 bits (108), Expect = 3e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || || || || ||||| || ||||||||||| ||||| || |||||||| || |||||| Sbjct 293 TGCTTACCTGCGAAGATAAGTCGTTGCTGATCTGGAGGGATGCCTTCTTTGTCTTGAATT 234 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 ||||| || ||||| || || | |||||| | ||| ||||| || || | ||||| || Sbjct 233 TTAGCCTTGACATTTTCGATGGTATCAGAAGCTTCTACTTCCAGAGTGATGGTCTTCCCT 174 Query 140712 GT 140713 || Sbjct 173 GT 172 >seq15082 Length=1985 Score = 89.7 bits (98), Expect = 2e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || || ||||||| ||||| || ||||||||||||| ||| ||||||| ||||| Sbjct 1701 ATGTATCCAGTTTCGGCCGTTTTTACGGCAGTATCAATTAGACCCTCACGACCTCCCATA 1642 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAA 378328 || |||||||| ||||||| |||||| |||||| ||| Sbjct 1641 GCGTGGAAGAAGAATTCAGCAGGAGTCAGTCCAGCAA 1605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1512254731835727