Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq7565 149 7e-31 seq120499 113 5e-20 seq91314 111 2e-19 seq67160 100 3e-16 >seq7565 Length=2537 Score = 149 bits (164), Expect = 7e-31 Identities = 165/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || ||||| ||| | || || ||||| || || || || || ||| | Sbjct 227 AATGCAGATTTTCGTCAAAACGTTGACGGGAAAGACGATAACCCTGGAAGTGGAGGCCTC 168 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||||| |||| ||||||| || || || ||||| || |||||||| |||||||| Sbjct 167 AGATACCATTGAAAATGTGAAGGCGAAGATCCAAGACAAAGAAGGAATTCCCCCAGACCA 108 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| | |||||||| || ||||| |||||||||| ||| || | | || || || Sbjct 107 GCAGCGATTGATTTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACATTGTCCGATTACAA 48 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTT 27624 | | || ||||| || || || || ||||| | |||||| Sbjct 47 TATTCAGAAGGAGTCGACCCTCCACTTAGTCCTTCGTCTT 8 Score = 143 bits (158), Expect = 3e-29 Identities = 121/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| ||||| ||||||||||| || | || || || || Sbjct 817 AATGCAGATCTTTGTGAAGACTCTTACGGGCAAGACTATCACATTGGAAGTCGAAGCATC 758 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||||| |||| |||| || || |||||||| ||||| |||||||||||||| || Sbjct 757 CGATACCATTGAAAATGTGAAAGCCAAGATTCAGGATAAGGAAGGAATTCCTCCAGATCA 698 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||| ||| | ||||||||||||||| ||| Sbjct 697 GCAACGTTTGATTTTTGCTGGTAAGTAAC 669 Score = 122 bits (134), Expect = 1e-22 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || || || |||||||||||||| || ||||| || || || Sbjct 2158 AATGCAGATTTTCGTAAAAACACTCACCGGCAAGACTATCACACTTGAAGTCGAAGCATC 2099 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | |||| | |||||||| || ||||||||||| |||||||||||||| || Sbjct 2098 CGACACAATCGAAAATGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCTCCAGATCA 2039 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAG 27549 |||||| || |||||||| ||| || Sbjct 2038 GCAGCGACTCATTTTTGCAGGTTAG 2014 Score = 122 bits (134), Expect = 1e-22 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 |||||||||||||| || || |||||||| || ||||| ||||| || ||||||||| | Sbjct 2465 ATAATGCAAATCTTCGTAAAAACGCTTACTGGAAAGACGATTACCCTCGAGGTTGAGGCT 2406 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | |||| ||| | ||||| || ||||| ||||| ||||| |||||||| || Sbjct 2405 TCCGACACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAAGAGGGCATTCCTCCCGAT 2346 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTA 27547 ||||| ||||| || ||||| |||| Sbjct 2345 CAGCAACGTCTGATCTTTGCAGGTA 2321 Score = 118 bits (130), Expect = 1e-21 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || || || ||||| || || || || ||||| || Sbjct 1529 AATGCAGATCTTCGTGAAGACTCTGACTGGGAAGACCATCACCCTGGAAGTTGAAGCATC 1470 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| ||| |||| ||||| || ||||| ||||| |||||||||||||| || Sbjct 1469 CGATACAATTGAGAATGTGAAAGCTAAGATCCAGGATAAGGAAGGAATTCCTCCAGATCA 1410 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAG 27549 |||||| | || |||||||||||| Sbjct 1409 GCAGCGATTGATCTTTGCTGGTAAG 1385 Score = 118 bits (130), Expect = 1e-21 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| || || ||||||||||||||||| || | || || || | Sbjct 1823 AATGCAGATCTTTGTAAAAACTCTTACCGGCAAGACTATCACATTGGAAGTCGAAGCTTC 1764 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | |||| ||||||| || || || ||||| ||||||||||||||||| || Sbjct 1763 TGACACAATCGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCAGATCA 1704 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAG 27549 |||||| | || ||||||||| || Sbjct 1703 GCAGCGATTGATCTTTGCTGGTGAG 1679 Score = 113 bits (124), Expect = 5e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| ||||| || ||||| || || ||||| || || || Sbjct 510 ATGCAAATCTTCGTCAAGACTCTTACTGGGAAGACCATCACCCTTGAAGTCGAAGCATCC 451 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || ||||||||||| ||||| |||||||| ||| Sbjct 450 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCAGATCAG 391 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAA 27552 ||||| | || ||||||||| || || Sbjct 390 CAGCGATTGATCTTTGCTGGTGAGTAA 364 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/99 (80%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 27536 TTTTTGCT-GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 ||||| || || || ||||||||||||| ||||||||| | ||||| || |||| ||| Sbjct 1627 TTTTTTCTAGGAAAACAACTCGAGGATGGTCGTACCCTTTCTGACTACAACATCCAGAAG 1568 Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || ||||| |||||| | ||| |||| ||||| || ||| Sbjct 1567 GAGTCCACACTTCATTTGGTCCTGCGACTTCGAGGAGGA 1529 >seq120499 Length=638 Score = 113 bits (124), Expect = 5e-20 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| |||||||| |||||||| |||||||| || || || Sbjct 133 ATGCAAATTTTCGTCAAGACCCTTACCGGGAAGACTATCACTCTTGAAGTCGAAGCATCC 74 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || |||||||||||||| |||||||| ||||| ||| Sbjct 73 GACACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAGGAAGGAATTCCCCCAGATCAG 14 Query 27526 CAGCG 27530 || || Sbjct 13 CAACG 9 Score = 111 bits (122), Expect = 2e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| |||||||| ||||| ||||| ||||| || || | Sbjct 435 ATGCAAATTTTCGTGAAGACCCTTACCGGGAAGACCATTACCCTTGAAGTCGAAGCTTCG 376 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || || |||||||| |||||||||||||| ||| Sbjct 375 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCTCCAGATCAG 316 Query 27526 CAGCGTCTAATTTTTGCTGGTAAG 27549 ||||| | || |||||||||||| Sbjct 315 CAGCGATTGATCTTTGCTGGTAAG 292 >seq91314 Length=789 Score = 111 bits (122), Expect = 2e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| ||||| |||||||| || || | || || || || Sbjct 600 ATGCAGATCTTCGTGAAGACACTTACGGGCAAGACAATCACATTGGAAGTCGAAGCATCC 541 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| |||| || || || ||||| ||||| |||||||| ||||| ||| Sbjct 540 GATACGATTGAAAATGTGAAAGCCAAGATCCAGGATAAGGAAGGAATTCCGCCAGATCAG 481 Query 27526 CAGCGTCTAATTTTTGCTGGTAAG 27549 ||||| | || |||||||||||| Sbjct 480 CAGCGATTGATCTTTGCTGGTAAG 457 Score = 100 bits (110), Expect = 3e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | || || ||||| || || || || || || || | Sbjct 305 ATGCAGATTTTTGTGAAGACTTTGACTGGGAAGACCATCACACTGGAAGTCGAAGCATCT 246 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | |||||||| || ||||||||||| ||||| || ||||| ||| Sbjct 245 GACACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATCCCCCCAGATCAG 186 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555 ||||| | |||||||||||| || || || Sbjct 185 CAGCGATTGATTTTTGCTGGTGAGTAAATC 156 >seq67160 Length=966 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||||||||| | || || ||||| || || ||||| || ||| | Sbjct 454 AATGCAAATCTTTGTCAAGACCTTAACTGGAAAGACCATCACGCTTGAAGTCGAGGCTTC 513 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| |||| | ||||| || || || ||||| || || || || ||||| || Sbjct 514 GGACACTATTGAAAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCACCAGATCA 573 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAG 27549 |||| | || || ||||| |||||| Sbjct 574 GCAGAGACTCATCTTTGCCGGTAAG 598 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || ||||| || ||||| || || || | ||||| ||| | |||| | |||||| Sbjct 172 ACAGGGAAGACCATCACTCTGGAAGTAGAAGCTTCTGATACCATCGAAAATGTCAAGGCT 231 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 |||||||| ||||| || || || |||||||| ||||| || || || || || |||||| Sbjct 232 AAAATTCAAGACAAAGAAGGCATCCCTCCAGATCAGCAACGACTTATCTTCGCAGGTAAG 291 Query 27550 CA 27551 || Sbjct 292 CA 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569208923880080