Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq7565 111 1e-19 seq120499 95.1 1e-14 seq67160 82.4 7e-11 >seq7565 Length=2537 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| |||| || ||| | || || || |||||||| | || Sbjct 226 ATGCAGATTTTCGTCAAAACGTTGACGGGAAAGACGATAACCCTGGAAGTGGAGGCCTCA 167 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || || |||||||||||||| || || || || || Sbjct 166 GATACCATTGAAAATGTGAAGGCGAAGATCCAAGACAAAGAAGGAATTCCCCCAGACCAG 107 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | |||||||| || | || || || || | ||||||||||| Sbjct 106 CAGCGATTGATTTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACATTGTCCGATTACAAT 47 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||||| |||||||||||| | || || || Sbjct 46 ATTCAGAAGGAGTCGACCCTCCACTTAGT 18 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||||||||||||| ||||||||| |||| || | ||||| ||| | || Sbjct 1822 ATGCAGATCTTTGTAAAAACTCTTACCGGCAAGACTATCACATTGGAAGTCGAAGCTTCT 1763 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || ||||||||||| || || || || ||||| Sbjct 1762 GACACAATCGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCAGATCAG 1703 Query 27108 CAGCGTTTAAT 27118 ||||| || || Sbjct 1702 CAGCGATTGAT 1692 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || |||||||| || || || ||| | ||||| || || || || | ||| Sbjct 2462 ATGCAAATCTTCGTAAAAACGCTTACTGGAAAGACGATTACCCTCGAGGTTGAGGCTTCC 2403 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || |||||||||||||| ||||| || |||||||| Sbjct 2402 GACACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAAGAGGGCATTCCTCCCGATCAG 2343 Query 27108 CAGCGT 27113 || ||| Sbjct 2342 CAACGT 2337 >seq120499 Length=638 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || || ||||| ||| |||| ||||||||||| ||| | || Sbjct 134 CATGCAAATTTTCGTCAAGACCCTTACCGGGAAGACTATCACTCTTGAAGTCGAAGCATC 75 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||||| ||||| || ||||| ||||| ||||| || || || ||||| Sbjct 74 CGACACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAGGAAGGAATTCCCCCAGATCA 15 Query 27107 ACAGCGTTTAAT 27118 || || || || Sbjct 14 GCAACGATTGAT 3 >seq67160 Length=966 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || | || || ||| | || || |||||||| || | || Sbjct 455 ATGCAAATCTTTGTCAAGACCTTAACTGGAAAGACCATCACGCTTGAAGTCGAGGCTTCG 514 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||| || ||||||||||||||||| ||||| ||||| Sbjct 515 GACACTATTGAAAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCACCAGATCAG 574 Query 27108 CAG 27110 ||| Sbjct 575 CAG 577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434078414911680