Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7565 127 5e-24 seq91314 100 7e-16 seq67160 96.9 8e-15 seq120499 93.3 1e-13 >seq7565 Length=2537 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| || || || || ||||| | | || | ||||| Sbjct 15 AGGACTAAGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGACAATGTGCGACCATCC 74 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || || | || || ||||| || |||| |||||| ||||| Sbjct 75 TCGAGCTGCTTGCCGGCAAAAATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCT 134 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| ||||| ||||| || ||| || || || || || |||||| Sbjct 135 TGGATCTTCGCCTTCACATTTTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGTC 194 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||||| | || || || || | ||||||| Sbjct 195 TTTCCCGTCAACGTTTTGACGAAAATCTGCATT 227 Score = 111 bits (122), Expect = 4e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||| || ||||| || || || || || || || ||||||| ||||||||||||||||| Sbjct 2010 GCTACTAACCTGCAAAAATGAGTCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGA 2069 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || || |||||||| ||||| || ||| || || || ||||| ||||| | Sbjct 2070 TCTTAGCCTTGACATTTTCGATTGTGTCGGATGCTTCGACTTCAAGTGTGATAGTCTTGC 2129 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCATT 211115 | ||||| || ||||| || | ||||||| Sbjct 2130 CGGTGAGTGTTTTTACGAAAATCTGCATT 2158 Score = 105 bits (116), Expect = 2e-17 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 210968 CTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGAT 211027 || ||| || || ||||| | || || || || ||||||| ||||||||| |||||||| Sbjct 1382 CTACTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGGAT 1441 Query 211028 CTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087 ||| |||||| || || || || || || |||||| || || ||||| ||||| || Sbjct 1442 CTTAGCTTTCACATTCTCAATTGTATCGGATGCTTCAACTTCCAGGGTGATGGTCTTCCC 1501 Query 211088 CGTGAGAGTCTTTACAAACACCTGCATT 211115 || |||||||| || || | ||||||| Sbjct 1502 AGTCAGAGTCTTCACGAAGATCTGCATT 1529 Score = 100 bits (110), Expect = 7e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034 || || ||||| | || || || || ||||| | ||||||||||||||||||||| Sbjct 371 CCAGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCC 430 Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 || ||||| ||||||||||| || ||| || || || ||||| ||||| || || ||| Sbjct 431 TTGACGTTCTCGATGGTGTCGGATGCTTCGACTTCAAGGGTGATGGTCTTCCCAGTAAGA 490 Query 211095 GTCTTTACAAACACCTGCAT 211114 ||||| || || | ||||| Sbjct 491 GTCTTGACGAAGATTTGCAT 510 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034 ||||| ||||| || ||||| || || ||||||| || || ||||| || ||||| Sbjct 2323 CCTGCAAAGATCAGACGTTGCTGATCGGGAGGAATGCCCTCTTTGTCTTGAATCTTGGCC 2382 Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 || || || || || ||||| || ||||||||||| || ||||||||||| || || Sbjct 2383 TTGACATTCTCAATAGTGTCGGAAGCCTCAACCTCGAGGGTAATCGTCTTTCCAGTAAGC 2442 Query 211095 GTCTTTACAAACACCTGCATT 211115 || ||||| || | |||||| Sbjct 2443 GTTTTTACGAAGATTTGCATT 2463 >seq91314 Length=789 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049 || || || || || || | ||||||||||||||||||||| || ||||| |||||| Sbjct 181 CGCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATG 240 Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109 |||||||| ||| || || || ||||| ||||| || || | |||||| ||||| | | Sbjct 241 GTGTCAGATGCTTCGACTTCCAGTGTGATGGTCTTCCCAGTCAAAGTCTTCACAAAAATC 300 Query 211110 TGCAT 211114 ||||| Sbjct 301 TGCAT 305 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || ||||| | || || || || || |||| ||||||||| ||||||||||| Sbjct 457 CTTACCAGCAAAGATCAATCGCTGCTGATCTGGCGGAATTCCTTCCTTATCCTGGATCTT 516 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 |||||| ||||| || || || || ||| || || | ||||| ||||| ||||| Sbjct 517 GGCTTTCACATTTTCAATCGTATCGGATGCTTCGACTTCCAATGTGATTGTCTTGCCCGT 576 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | |||||| Sbjct 577 AAGTGTCTTCACGAAGATCTGCAT 600 >seq67160 Length=966 Score = 96.9 bits (106), Expect = 8e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 210968 CTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGAT 211027 |||||| |||||||||||||| ||||| || || ||||| | ||||| ||||| || || Sbjct 294 CTGCTTACCTGCGAAGATAAGTCGTTGCTGATCTGGAGGGATGCCTTCTTTGTCTTGAAT 235 Query 211028 CTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCC 211087 || || || ||||||||||| ||||| ||| || || |||||||| ||||| || Sbjct 234 TTTAGCCTTGACATTTTCGATGGTATCAGAAGCTTCTACTTCCAGAGTGATGGTCTTCCC 175 Query 211088 CGT 211090 || Sbjct 174 TGT 172 >seq120499 Length=638 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || ||||| | || || || || ||||||| |||||||||||| |||||||| Sbjct 292 CTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTT 351 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| ||||||||||| || ||| || || || || || ||||| || || Sbjct 352 GGCCTTGACGTTCTCGATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTCTTCCCGGT 411 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || | ||||| Sbjct 412 AAGGGTCTTCACGAAAATTTGCAT 435 Score = 91.5 bits (100), Expect = 3e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 210982 AGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGT 211041 |||| | ||||| || || || |||| ||||||||||||||| ||||| || |||| Sbjct 1 AGATCAATCGTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGAATCTTGGCCTTGACGT 60 Query 211042 TTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTA 211101 | || |||||||| || ||| || || |||||||| ||||| || || || ||||| | Sbjct 61 TCTCAATGGTGTCGGATGCTTCGACTTCAAGAGTGATAGTCTTCCCGGTAAGGGTCTTGA 120 Query 211102 CAAACACCTGCAT 211114 | || | ||||| Sbjct 121 CGAAAATTTGCAT 133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156857288727785