Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq72481 102 1e-16 seq89190 89.7 7e-13 >seq72481 Length=921 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 77359 CTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGT 77418 |||||| | ||||||||| ||||| | |||||| || || ||||| ||||||||||| || Sbjct 514 CTTGTGCAAATTCGATACAGCTATGCGAGCAGCAAGTATGGCATAATCAGGATGTTGGGT 573 Query 77419 AGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTT 77478 || | ||||| |||||||||| || |||| || || | || || ||||| || Sbjct 574 GGTCATCGAAGCTGCGGTTTCTGCCGCCAAGTTATCCAACTCCACTGTGGTCACTCCTTT 633 Query 77479 ATATAGCCCTTGAATAACTTTCATGGCTA 77507 |||| ||| ||| |||||||| |||| Sbjct 634 GTATAATCCTCCAATGACTTTCATTGCTA 662 >seq89190 Length=803 Score = 89.7 bits (98), Expect = 7e-13 Identities = 113/153 (74%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 76692 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTAT 76751 |||| | ||||| | ||||| ||||| ||||| || || | | | || || ||||| | Sbjct 304 ACTCAAAGATATCTGCGTGCCAAGGTTCGAGATAGATGGCAAAAGCTCCAGGACGTTTGT 245 Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811 | || |||||||| | ||||| ||||||||||| || || | | ||| |||| || | Sbjct 244 TTCCACCCTGATCCACATATCGAGCAGTGTTATTGTACACACGAAGCATAGGAACAAGCC 185 Query 76812 CGTTAGATGTACCATTTGTTCCAGAAATATAAC 76844 | |||||||| ||||| || | |||| ||||| Sbjct 184 CATTAGATGTGCCATTAGT--CTGAAA-ATAAC 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711557465234880