Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_031909.1 Length=134927 Score E Sequences producing significant alignments: (Bits) Value seq11541 104 2e-17 >seq11541 Length=2193 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 122816 TTAACAAAATTCTCTCTACCAAATATCTCATCCATAAGTACTTTTAAATATGCTTGCTCG 122875 |||| | |||||||||| ||||| || |||||||| || ||||| ||||| | || Sbjct 1481 TTAATATAATTCTCTCTTCCAAAAATATCATCCATTAGAACTTTCAAATAGGAAACTTCA 1540 Query 122876 TTATCGTCACATTGAACGAATATAACACCATCATCTTTTAAAAATTCTCTAGCTACTTCT 122935 |||| || | | ||| ||||||| ||||||||| | |||||| |||| |||||| Sbjct 1541 TTATAATCCAACTCAACAAATATAAGACCATCATCACGCATTAATTCTTTAGCAACTTCT 1600 Query 122936 AATCTTTCTTTCATAAATTTTAACCAA 122962 ||||| | |||||||| |||||||| Sbjct 1601 AATCTATTCTTCATAAAAGTTAACCAA 1627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430828785010312