Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cylicostephanus_20goldi_20[genbank_20GCA_5F000951155.1_202014-10-12] 154,509 sequences; 173,362,437 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7565 116 3e-21 seq120499 104 2e-17 seq91314 98.7 7e-16 >seq7565 Length=2537 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || || |||||||||| | | ||| | || || |||||||| |||||||| Sbjct 35 CTCCTTCTGAATATTGTAATCGGACAATGTGCGACCATCCTCGAGCTGCTTGCCGGCAAA 94 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| |||||||| |||| || | ||||| || || |||||| ||||| | Sbjct 95 AATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGGATCTTCGCCTTCACATT 154 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||||| || | || ||||| |||| || |||||||||||||| | || || || Sbjct 155 TTCAATGGTATCTGAGGCCTCCACTTCCAGGGTTATCGTCTTTCCCGTCAACGTTTTGAC 214 Query 44326 GAAGATTTGCAT 44337 ||| || ||||| Sbjct 215 GAAAATCTGCAT 226 Score = 100 bits (110), Expect = 2e-16 Identities = 109/142 (77%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||||||||| ||||||||||||| ||| | |||||||| ||| ||||| || Sbjct 371 CCAGCAAAGATCAATCGCTGCTGATCTGGAGGGATTCCTTCCTTGTCCTGGATCTT-GGC 429 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 | | |||| | |||||||||| | ||| || || | || || ||||| || || || Sbjct 430 CTTGACGTTCTCGATGGTGTCGGATGCTTCGACTTCAAGGGTGATGGTCTTCCCAGTAAG 489 Query 44317 GGTCTTCACGAAGATTTGCATG 44338 ||||| ||||||||||||||| Sbjct 490 AGTCTTGACGAAGATTTGCATG 511 Score = 98.7 bits (108), Expect = 7e-16 Identities = 112/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 44191 CTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTAT 44250 || ||| || ||||||||||| ||||||||||||| ||| | |||||||| ||| || Sbjct 1382 CTACTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGGAT 1441 Query 44251 CTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 ||| |||| | ||| | || || |||| | ||| || |||| || || ||||| | Sbjct 1442 CTT-AGCTTTCACATTCTCAATTGTATCGGATGCTTCAACTTCCAGGGTGATGGTCTTCC 1500 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || |||||||||||||| ||||| Sbjct 1501 CAGTCAGAGTCTTCACGAAGATCTGCAT 1528 Score = 82.4 bits (90), Expect = 5e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || |||||||||| ||| |||||||| | ||| | || || || || ||||| | Sbjct 2323 CCTGCAAAGATCAGACGTTGCTGATCGGGAGGAATGCCCTCTTTGTCTTGAATCTTGGCC 2382 Query 44258 TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGG 44317 || | | | || ||||||| | || ||||| | |||||||||||||| || || Sbjct 2383 TTGACATTCTCAATAGTGTCGGAAGCCTCAACCTCGAGGGTAATCGTCTTTCCAGTAAGC 2442 Query 44318 GTCTTCACGAAGATTTGCATGATGTGAA 44345 || || |||||||||||||| || |||| Sbjct 2443 GTTTTTACGAAGATTTGCATTATCTGAA 2470 >seq120499 Length=638 Score = 104 bits (114), Expect = 2e-17 Identities = 112/146 (77%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253 ||| || ||||||||||| ||||||||||||| ||| | |||||||| || ||||| Sbjct 292 CTTACCAGCAAAGATCAATCGCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTT 351 Query 44254 CTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCG 44312 || | | |||| | |||||||| | | ||| || || | ||||| ||||| || | Sbjct 352 -GGCCTTGACGTTCTCGATGGTGTCCGAAGCTTCGACTTCAAGGGTAATGGTCTTCCCGG 410 Query 44313 TGAGGGTCTTCACGAAGATTTGCATG 44338 | |||||||||||||| ||||||||| Sbjct 411 TAAGGGTCTTCACGAAAATTTGCATG 436 >seq91314 Length=789 Score = 98.7 bits (108), Expect = 7e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253 ||| || ||||||||||| ||||||||||||| || | |||||||| ||| ||||| Sbjct 457 CTTACCAGCAAAGATCAATCGCTGCTGATCTGGCGGAATTCCTTCCTTATCCTGGATCTT 516 Query 44254 CTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGT 44313 |||| || | || || |||| | ||| || |||| || || ||||| ||||| Sbjct 517 GGCTTTCACATTTTCAATCGTATCGGATGCTTCGACTTCCAATGTGATTGTCTTGCCCGT 576 Query 44314 GAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||||||||| ||||| Sbjct 577 AAGTGTCTTCACGAAGATCTGCAT 600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359312509840053