Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1461 86.0 1e-11 seq79 84.2 5e-11 >seq1461 Length=7029 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||| ||||||| ||||||||| |||| |||||||||| Sbjct 1123 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 1064 Query 165770 CCCAC 165774 ||||| Sbjct 1063 CCCAC 1059 >seq79 Length=364097 Score = 84.2 bits (92), Expect = 5e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||| ||||||| ||||||||| |||| ||||||||| Sbjct 36473 TGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 36532 Query 165769 CCCC 165772 |||| Sbjct 36533 CCCC 36536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057726998530910