Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq143 87.8 2e-12 >seq143 Length=269893 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| |||||||||||||| || || || ||| | || || || |||| Sbjct 138439 ATGCAAATTTTCGTGAAGACTCTGACAGGGAAGACAATAACCCTTGAAGTCGAGGCGTCG 138498 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || ||||||||||| | || || || ||| Sbjct 138499 GACACAATTGAGAATGTGAAAGCTAAGATTCAAGACAAGGAAGGGATCCCTCCAGATCAG 138558 Query 31313 CAGCGTCTAATATTCGCTGGCAA 31335 |||||| | ||||||||||| || Sbjct 138559 CAGCGTTTGATATTCGCTGGTAA 138581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445726520623440