Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 2e-11 >seq9 Length=784367 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 138473 TACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTT 138532 |||| | | | ||||| |||||||| || || || || ||||||||||| ||| ||||| Sbjct 113839 TACCAGCAAAAATTAGCCGCTGTTGATCTGGTGGGATTCCTTCTTTGTCT-TGAATTTTT 113781 Query 138533 GTTTTAATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTC 138591 | ||| | | || | ||||| | | ||||| || | || | |||||||||||| Sbjct 113780 GCTTTCACATTCTCAATTGTGTCTGAAGCTTCCACTTCAAGAGTGATAGTTTTACCAGTC 113721 Query 138592 AGAGTTTTTACAAAAATCTGCAT 138614 | ||||| |||||||||||||| Sbjct 113720 AAGGTTTTGACAAAAATCTGCAT 113698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496218003125040