Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq344 89.7 7e-13 >seq344 Length=133491 Score = 89.7 bits (98), Expect = 7e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 197144 AGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCA 197203 || |||| || || || ||||| | ||||| | || | |||| ||||||||||| | Sbjct 36693 AGGCTCCAATGACTACAAGATCTAATGTGTCTCCTACGCTATCCAAATAATCTTTCTTAA 36634 Query 197204 GTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCT 197263 |||| | |||| | ||||| |||| || ||||| || ||||| ||||| || || | Sbjct 36633 GTTTCAACCAGTTGTGCGATCTTCTGGCGATTTCGTAAGTAGCGTTAACGTCAAGTGTTT 36574 Query 197264 TGATCATCAATCCCTCGCAATCTTCCT 197290 | ||||||||||| || |||| | ||| Sbjct 36573 TTATCATCAATCCTTCACAATTTCCCT 36547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676669058078160