Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq919 107 1e-18 >seq919 Length=24097 Score = 107 bits (118), Expect = 1e-18 Identities = 237/353 (67%), Gaps = 2/353 (1%) Strand=Plus/Minus Query 26021 TCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCT 26080 || ||||| || | |||||||| |||||||| || ||||| ||| |||||| | Sbjct 20702 TCGAAAATGTCGGCATGCCATGGCTCTAAATAAATTGCAAATGCTCCTGGTCTTTTGTTT 20643 Query 26081 CCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCA 26140 ||||||||||| || |||| ||||| | ||| | || || ||||||||| || ||| Sbjct 20642 CCACCTTGATCAACATATCGAGCAGTATTGTTGTATACACGCAGCATTGGAACCAAACCA 20583 Query 26141 GTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGA 26200 | ||| || || || | |||| || || || | ||||| | || ||| Sbjct 20582 TTGGAAGTACCATTAGTACCGCCAATCAACGAACCAGTAGCCCTAATCTTATGCACATTC 20523 Query 26201 ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAAT-CTGAAACTGTATCGAAAAT 26259 | ||||||||||| || | |||||| || ||||| | || | | ||||| | || Sbjct 20522 AAGCCGATTCCACCGGCACTTTTTGAGATCAAAGCACACTGCTTTAGC-GTATCATATAT 20464 Query 26260 TCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGT 26319 || ||| ||| | |||| || || || || ||||| | ||| | | | Sbjct 20463 CCCCGCAATGGAATCTTCACTCATAGTCAACAAGAAGCACGAAGAAAGTTGTGGCCAATT 20404 Query 26320 TGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTCA 26372 |||||||| ||| || | || |||| |||||||| |||||| |||||||| Sbjct 20403 TGTTCCTGCATTGAACAGCGTTGGTGACGCATGAGTGAAATATCGTTCACTCA 20351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253017928348775