Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq919 111 5e-19 >seq919 Length=24097 Score = 111 bits (122), Expect = 5e-19 Identities = 195/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 || ||||| ||||| ||||| |||||||| || ||| | |||| ||||| |||| | | Sbjct 20645 TTTCCACCTTGATCAACATATCGAGCAGTATTGTTGTATACACGCAGCATTGGAACCAAA 20586 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 ||||||||||| ||||| || |||| ||| |||||||| | | || ||||| | | Sbjct 20585 CCATTGGAAGTACCATTAGTACCGCCAATCAACGAACCAGTAGCCCTAATCTTATGCACA 20526 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 | | || || ||||| | | ||| || || ||| || | ||||| |||| | Sbjct 20525 TTCAAGCCGATTCCACCGGCACTTTTTGAGATCAAAGCACACTGCTTTAGCGTATCATAT 20466 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 || || |||| ||||| || ||| | | | |||||||| | ||| || | Sbjct 20465 ATCCCCGCAATGGAATCTTCACTCATAGTCAACAAGAAGCACGAAGAAAGTTGTGGCCAA 20406 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343 |||||| || ||||| || || |||| |||||| | ||||| Sbjct 20405 TTTGTTCCTGCATTGAACAGCGTTGGTGACGCATGAGTGAAATA 20362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471682635705909