Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq100 96.9 3e-15 >seq100 Length=335030 Score = 96.9 bits (106), Expect = 3e-15 Identities = 88/109 (81%), Gaps = 3/109 (3%) Strand=Plus/Plus Query 43888 TGAAAATTTG--GTTAGT-CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944 |||||||||| | ||| ||||| || ||||||||||| | || || || || | ||| Sbjct 309093 TGAAAATTTGTAGGTAGAGCGGTTCTCGAAAGAAGTTCAAATTCCCGAGGCTCGTTTTTT 309152 Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGT 43993 ||||| |||||||| ||||| |||||||||||||| || ||||||||| Sbjct 309153 CTATGGCTTTCAAATCGCCATTGAAAATATTCATTCAGAGATGTACAGT 309201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397421331527785