Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyocaulus_20viviparus_20[genbank_20GCA_5F000816705.1_202015-03- 12] 7,157 sequences; 160,963,781 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq271 89.7 4e-13 >seq271 Length=165737 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 ||||| |||||||| || || || |||| ||| | |||||||| || ||||| ||| Sbjct 44782 CCGGCGAAGATCAACCGTTGTTGGTCTGGAGGAATGCCTTCCTTATCTTGGATCTT-TGC 44724 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || || ||| | |||||||| | || ||||| || | || || || ||||| || || Sbjct 44723 TTTAACATTCTCAATGGTGTCAGAGGCCTCCACTTCAAGAGTGATAGTTTTTCCAGTAAG 44664 Query 44317 GGTCTTCACGAAGATTTGCAT 44337 ||||||||||| |||||||| Sbjct 44663 AGTCTTCACGAAAATTTGCAT 44643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359958999499869