Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_000924.1 Length=61670 Score E Sequences producing significant alignments: (Bits) Value seq25371 345 2e-90 seq22751 244 4e-60 >seq25371 Length=205 Score = 345 bits (382), Expect = 2e-90 Identities = 197/201 (98%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 14707 GCTTTCCGGGAAAACGGGATCACCTCGATGGAACAGGTTAACGCAGGAATGCGCGTAGCC 14766 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 5 GCTTTTCGGGAAAACGGGATCACCACGATGGAACAGGTTAACGCAGGAATGCGCGTAGCC 64 Query 14767 CGTCGGCAGAATCGACCATTTCTTCCATCACCCGGGCAGTTTGTTGCATGGTGCCGGGAA 14826 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 65 CGTCGGCAGAATCGACCATTTCTGCCATCACCCGGGCAGTTTGTTGCATGGTGCCGGGAA 124 Query 14827 GAAGCATCCGTTATCGCCGGACTGCCAAACGTCAGCGAGCTGGTTGATATGGTTTACGAG 14886 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 GAAGCATCCGTTACCGCCGGACTGCCAAACGTCAGCGAGCTGGTTGATATGGTTTACGAG 184 Query 14887 TATTGCCGGAAGCGAGGCCTG 14907 ||||||||||||||||||||| Sbjct 185 TATTGCCGGAAGCGAGGCCTG 205 >seq22751 Length=317 Score = 244 bits (270), Expect = 4e-60 Identities = 143/148 (97%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 6100 GGGAGGTAAACGGGCATTTCAGCTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 6159 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 141 GGGAGGTAAACGGGTATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 200 Query 6160 AGCAGGCGGTGCGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 6219 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 201 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 260 Query 6220 CGGAAGTGAACTCAAAGAGGGTTCTGGC 6247 |||||||||| ||||| ||||||||||| Sbjct 261 CGGAAGTGAATTCAAACAGGGTTCTGGC 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197162538071040