Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1438 98.7 7e-16 >seq1438 Length=20597 Score = 98.7 bits (108), Expect = 7e-16 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 102054 GCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAA 102113 ||||| ||| || ||||| |||||||| | |||||||||| ||| |||| || |||| Sbjct 1454 GCCTCACCTGGAAGCCATAAACAGGTCCTAAATCTCCTTCAGCTCGGTCAGTGAAGCCAA 1395 Query 102114 GTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATA 102173 ||| || | |||| | ||||||||| ||||||||||| | || || | |||| Sbjct 1394 GTTGGTCGAGAAATTGCCGAGATCCATTGGCATCCCAAATTTTGACACCTTTATCAGATA 1335 Query 102174 GCT-CTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTC 102232 | |||||| | ||| ||||| || ||||| | || ||||||||||| ||| || Sbjct 1334 AATGCTTTGC-ATTTGTATCTCCTCGAATGAACCATAGCAACTCTTCAACAACGCCTTTC 1276 Query 102233 CAA 102235 ||| Sbjct 1275 CAA 1273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361138665735560