Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_001416.1
Length=48502
Score E
Sequences producing significant alignments: (Bits) Value
seq20922 792 0.0
seq21498 720 0.0
seq24227 444 2e-120
seq24591 419 7e-113
seq25371 363 5e-96
seq22751 262 1e-65
>seq20922
Length=439
Score = 792 bits (878), Expect = 0.0
Identities = 439/439 (100%), Gaps = 0/439 (0%)
Strand=Plus/Minus
Query 4884 TATGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCT 4943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 TATGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCT 380
Query 4944 CCCGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACA 5003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 379 CCCGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACA 320
Query 5004 GTAATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCA 5063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 319 GTAATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCA 260
Query 5064 GCCATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGC 5123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 GCCATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGC 200
Query 5124 AGTCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCC 5183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 199 AGTCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCC 140
Query 5184 TGTCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTG 5243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 TGTCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTG 80
Query 5244 ATGCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATG 5303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 79 ATGCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATG 20
Query 5304 CACTGGATGCACGTAAATC 5322
|||||||||||||||||||
Sbjct 19 CACTGGATGCACGTAAATC 1
>seq21498
Length=399
Score = 720 bits (798), Expect = 0.0
Identities = 399/399 (100%), Gaps = 0/399 (0%)
Strand=Plus/Plus
Query 11973 CTTCAGGCAGAACTCCGGACGCTGGAGAAGCATGCCGGAGCAAATGAGAAAATCAGCCAG 12032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CTTCAGGCAGAACTCCGGACGCTGGAGAAGCATGCCGGAGCAAATGAGAAAATCAGCCAG 60
Query 12033 CAGCGCCGGGATTTGTGGAAGGCGGAGAGTCAGTTCGCGGTACTGGAGGAGGCGGCGCAA 12092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CAGCGCCGGGATTTGTGGAAGGCGGAGAGTCAGTTCGCGGTACTGGAGGAGGCGGCGCAA 120
Query 12093 CGTCGCCAGCTGTCTGCACAGGAGAAATCCCTGCTGGCGCATAAAGATGAGACGCTGGAG 12152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CGTCGCCAGCTGTCTGCACAGGAGAAATCCCTGCTGGCGCATAAAGATGAGACGCTGGAG 180
Query 12153 TACAAACGCCAGCTGGCTGCACTTGGCGACAAGGTTACGTATCAGGAGCGCCTGAACGCG 12212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TACAAACGCCAGCTGGCTGCACTTGGCGACAAGGTTACGTATCAGGAGCGCCTGAACGCG 240
Query 12213 CTGGCGCAGCAGGCGGATAAATTCGCACAGCAGCAACGGGCAAAACGGGCCGCCATTGAT 12272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CTGGCGCAGCAGGCGGATAAATTCGCACAGCAGCAACGGGCAAAACGGGCCGCCATTGAT 300
Query 12273 GCGAAAAGCCGGGGGCTGACTGACCGGCAGGCAGAACGGGAAGCCACGGAACAGCGCCTG 12332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GCGAAAAGCCGGGGGCTGACTGACCGGCAGGCAGAACGGGAAGCCACGGAACAGCGCCTG 360
Query 12333 AAGGAACAGTATGGCGATAATCCGCTGGCGCTGAATAAC 12371
|||||||||||||||||||||||||||||||||||||||
Sbjct 361 AAGGAACAGTATGGCGATAATCCGCTGGCGCTGAATAAC 399
>seq24227
Length=246
Score = 444 bits (492), Expect = 2e-120
Identities = 246/246 (100%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 16425 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 16484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 246 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 187
Query 16485 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 16544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 186 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 127
Query 16545 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 16604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 126 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 67
Query 16605 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 16664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 7
Query 16665 CAGCTT 16670
||||||
Sbjct 6 CAGCTT 1
>seq24591
Length=232
Score = 419 bits (464), Expect = 7e-113
Identities = 232/232 (100%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 17284 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 17343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 173
Query 17344 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGG 17403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGG 113
Query 17404 GAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTG 17463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 112 GAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTG 53
Query 17464 CTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 17515
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 52 CTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 1
>seq25371
Length=205
Score = 363 bits (402), Expect = 5e-96
Identities = 201/201 (100%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 39798 GCTTTTCGGGAAAACGGGATCACCACGATGGAACAGGTTAACGCAGGAATGCGCGTAGCC 39857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5 GCTTTTCGGGAAAACGGGATCACCACGATGGAACAGGTTAACGCAGGAATGCGCGTAGCC 64
Query 39858 CGTCGGCAGAATCGACCATTTCTGCCATCACCCGGGCAGTTTGTTGCATGGTGCCGGGAA 39917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 65 CGTCGGCAGAATCGACCATTTCTGCCATCACCCGGGCAGTTTGTTGCATGGTGCCGGGAA 124
Query 39918 GAAGCATCCGTTACCGCCGGACTGCCAAACGTCAGCGAGCTGGTTGATATGGTTTACGAG 39977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 125 GAAGCATCCGTTACCGCCGGACTGCCAAACGTCAGCGAGCTGGTTGATATGGTTTACGAG 184
Query 39978 TATTGCCGGAAGCGAGGCCTG 39998
|||||||||||||||||||||
Sbjct 185 TATTGCCGGAAGCGAGGCCTG 205
>seq22751
Length=317
Score = 262 bits (290), Expect = 1e-65
Identities = 147/148 (99%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 31620 GGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 31679
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 141 GGGAGGTAAACGGGTATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 200
Query 31680 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 31739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 201 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 260
Query 31740 CGGAAGTGAATTCAAACAGGGTTCTGGC 31767
||||||||||||||||||||||||||||
Sbjct 261 CGGAAGTGAATTCAAACAGGGTTCTGGC 288
Score = 188 bits (208), Expect = 2e-43
Identities = 110/114 (96%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 1511 CTCCAGCGTGTTTTATCTCTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGA 1570
|||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 CTCCAGCGCTTTTTAACACTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGA 73
Query 1571 CTTTACTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGG 1624
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 72 CTTTACTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGG 19
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155037727886080
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