Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq20922 792 0.0 seq21498 720 0.0 seq24227 444 2e-120 seq24591 419 7e-113 seq25371 363 5e-96 seq22751 262 1e-65 >seq20922 Length=439 Score = 792 bits (878), Expect = 0.0 Identities = 439/439 (100%), Gaps = 0/439 (0%) Strand=Plus/Minus Query 4884 TATGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCT 4943 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 439 TATGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCT 380 Query 4944 CCCGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACA 5003 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 379 CCCGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACA 320 Query 5004 GTAATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCA 5063 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 319 GTAATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCA 260 Query 5064 GCCATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGC 5123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 259 GCCATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGC 200 Query 5124 AGTCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCC 5183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 199 AGTCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCC 140 Query 5184 TGTCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTG 5243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 139 TGTCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTG 80 Query 5244 ATGCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATG 5303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 79 ATGCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATG 20 Query 5304 CACTGGATGCACGTAAATC 5322 ||||||||||||||||||| Sbjct 19 CACTGGATGCACGTAAATC 1 >seq21498 Length=399 Score = 720 bits (798), Expect = 0.0 Identities = 399/399 (100%), Gaps = 0/399 (0%) Strand=Plus/Plus Query 11973 CTTCAGGCAGAACTCCGGACGCTGGAGAAGCATGCCGGAGCAAATGAGAAAATCAGCCAG 12032 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTTCAGGCAGAACTCCGGACGCTGGAGAAGCATGCCGGAGCAAATGAGAAAATCAGCCAG 60 Query 12033 CAGCGCCGGGATTTGTGGAAGGCGGAGAGTCAGTTCGCGGTACTGGAGGAGGCGGCGCAA 12092 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CAGCGCCGGGATTTGTGGAAGGCGGAGAGTCAGTTCGCGGTACTGGAGGAGGCGGCGCAA 120 Query 12093 CGTCGCCAGCTGTCTGCACAGGAGAAATCCCTGCTGGCGCATAAAGATGAGACGCTGGAG 12152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CGTCGCCAGCTGTCTGCACAGGAGAAATCCCTGCTGGCGCATAAAGATGAGACGCTGGAG 180 Query 12153 TACAAACGCCAGCTGGCTGCACTTGGCGACAAGGTTACGTATCAGGAGCGCCTGAACGCG 12212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TACAAACGCCAGCTGGCTGCACTTGGCGACAAGGTTACGTATCAGGAGCGCCTGAACGCG 240 Query 12213 CTGGCGCAGCAGGCGGATAAATTCGCACAGCAGCAACGGGCAAAACGGGCCGCCATTGAT 12272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CTGGCGCAGCAGGCGGATAAATTCGCACAGCAGCAACGGGCAAAACGGGCCGCCATTGAT 300 Query 12273 GCGAAAAGCCGGGGGCTGACTGACCGGCAGGCAGAACGGGAAGCCACGGAACAGCGCCTG 12332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GCGAAAAGCCGGGGGCTGACTGACCGGCAGGCAGAACGGGAAGCCACGGAACAGCGCCTG 360 Query 12333 AAGGAACAGTATGGCGATAATCCGCTGGCGCTGAATAAC 12371 ||||||||||||||||||||||||||||||||||||||| Sbjct 361 AAGGAACAGTATGGCGATAATCCGCTGGCGCTGAATAAC 399 >seq24227 Length=246 Score = 444 bits (492), Expect = 2e-120 Identities = 246/246 (100%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 16425 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 16484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 246 CTGCGACCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGC 187 Query 16485 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 16544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 186 GTACCTGACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCG 127 Query 16545 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 16604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 126 CTGTATGCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAA 67 Query 16605 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 16664 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 66 GACGTGGACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTA 7 Query 16665 CAGCTT 16670 |||||| Sbjct 6 CAGCTT 1 >seq24591 Length=232 Score = 419 bits (464), Expect = 7e-113 Identities = 232/232 (100%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 17284 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 17343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 232 GAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACAGAGTGGCACGGTG 173 Query 17344 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGG 17403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 172 AATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCACTGCAGACAGCGGG 113 Query 17404 GAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTG 17463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 112 GAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGGCGTGAGTTTCCTG 53 Query 17464 CTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 17515 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52 CTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAGCACGG 1 >seq25371 Length=205 Score = 363 bits (402), Expect = 5e-96 Identities = 201/201 (100%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 39798 GCTTTTCGGGAAAACGGGATCACCACGATGGAACAGGTTAACGCAGGAATGCGCGTAGCC 39857 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5 GCTTTTCGGGAAAACGGGATCACCACGATGGAACAGGTTAACGCAGGAATGCGCGTAGCC 64 Query 39858 CGTCGGCAGAATCGACCATTTCTGCCATCACCCGGGCAGTTTGTTGCATGGTGCCGGGAA 39917 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 65 CGTCGGCAGAATCGACCATTTCTGCCATCACCCGGGCAGTTTGTTGCATGGTGCCGGGAA 124 Query 39918 GAAGCATCCGTTACCGCCGGACTGCCAAACGTCAGCGAGCTGGTTGATATGGTTTACGAG 39977 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 GAAGCATCCGTTACCGCCGGACTGCCAAACGTCAGCGAGCTGGTTGATATGGTTTACGAG 184 Query 39978 TATTGCCGGAAGCGAGGCCTG 39998 ||||||||||||||||||||| Sbjct 185 TATTGCCGGAAGCGAGGCCTG 205 >seq22751 Length=317 Score = 262 bits (290), Expect = 1e-65 Identities = 147/148 (99%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 31620 GGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 31679 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 141 GGGAGGTAAACGGGTATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGGGAG 200 Query 31680 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 31739 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 201 AGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGC 260 Query 31740 CGGAAGTGAATTCAAACAGGGTTCTGGC 31767 |||||||||||||||||||||||||||| Sbjct 261 CGGAAGTGAATTCAAACAGGGTTCTGGC 288 Score = 188 bits (208), Expect = 2e-43 Identities = 110/114 (96%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 1511 CTCCAGCGTGTTTTATCTCTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGA 1570 |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 132 CTCCAGCGCTTTTTAACACTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGA 73 Query 1571 CTTTACTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGG 1624 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72 CTTTACTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGG 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155037727886080