Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq3028 105 6e-18 >seq3028 Length=62347 Score = 105 bits (116), Expect = 6e-18 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | ||||| |||||||| |||||||| || ||| |||| | | Sbjct 28316 ATGCAAATTTTCGTGAAAACTTTGACGGGTAAAACCATAACGTTGGAAGTGGAAGCATCG 28257 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | || |||| |||||| || || || ||| | || ||| ||| Sbjct 28256 GATACGATCGAGAATGTTAAAGCAAAAATCCAAGACAAGGAGGGTATTCCACCAGACCAA 28197 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 || |||| |||||||| || || |||||||| ||| || | ||| | ||||| | Sbjct 28196 CAGCGACTGATCTTTGCCGGGAAGCAACTGGAGGATGGTCGTACGTTATCG--GATTATA 28139 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGT 29170 |||||||||||||||| || |||||| |||| Sbjct 28138 ATATTCAGAAGGAATCGACGCTTCACTTGGT 28108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428202567981800