Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq20922 275 2e-69 >seq20922 Length=439 Score = 275 bits (304), Expect = 2e-69 Identities = 316/425 (74%), Gaps = 0/425 (0%) Strand=Plus/Minus Query 4739 TGGGCGCTGGCCAATGACATGAACTGCAGCGCAGGGCAGCTTATTGCCAGTTCAGCATCG 4798 |||||||| ||||| |||||||||||||| ||||| ||| | |||||||| | || || Sbjct 437 TGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCTCC 378 Query 4799 CGGCGGCTGGTCACACAAACGGCCAGAACCGGATCCATCGGGGTCATGATGGCGCACAGC 4858 ||||| |||||||| || || ||| | || || |||||||| ||||||||||| ||||| Sbjct 377 CGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACAGT 318 Query 4859 AACTATGGTGCTGCGCTCAAAACTAACGGCGTTGAGGTCTCGCTGATTTACAGCGGCGAT 4918 || || ||||||||||| | | | || || || || ||||||||||||||||| Sbjct 317 AATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCAGC 258 Query 4919 CACAAGGTCGACGGCAACCCTTACGAAAAACTACCAGAAGATGTGCGTGCTGATTTCCAG 4978 || ||||| || |||||||| ||| | || || || || || || | | ||| Sbjct 257 CATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGCAG 198 Query 4979 ACGCGTATCGATGCCACTCGTCAGATGTTCGCCGAAAAGGTTTCCGCTTATACCGGTATG 5038 | || || || || || || |||||||| || | ||||| || || |||||||| || Sbjct 197 TCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCCTG 138 Query 5039 TCCGTTCAGGACGTACTGGACACCGAAGCGGCAGTATTCTCCGGCCAGGAGTCAGTGGAC 5098 ||||| |||| || ||||| ||||| || ||||| | | ||| |||||| | | || Sbjct 137 TCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTGAT 78 Query 5099 AACGGTTTGGCGGATGAACTTGTTAACAATACCGATGCGCTCGGCGTGATGCGCGAAGCA 5158 ||| |||| |||||||||||||||| ||||||||| || ||| ||||| || ||| Sbjct 77 GCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATGCA 18 Query 5159 CTCGA 5163 || || Sbjct 17 CTGGA 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148233393798640