Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_001901.1
Length=46375
Score E
Sequences producing significant alignments: (Bits) Value
seq20922 275 2e-69
>seq20922
Length=439
Score = 275 bits (304), Expect = 2e-69
Identities = 316/425 (74%), Gaps = 0/425 (0%)
Strand=Plus/Minus
Query 4739 TGGGCGCTGGCCAATGACATGAACTGCAGCGCAGGGCAGCTTATTGCCAGTTCAGCATCG 4798
|||||||| ||||| |||||||||||||| ||||| ||| | |||||||| | || ||
Sbjct 437 TGGGCGCTTGCCAACGACATGAACTGCAGTGCAGGTCAGTTGCTTGCCAGTGCCGCCTCC 378
Query 4799 CGGCGGCTGGTCACACAAACGGCCAGAACCGGATCCATCGGGGTCATGATGGCGCACAGC 4858
||||| |||||||| || || ||| | || || |||||||| ||||||||||| |||||
Sbjct 377 CGGCGTCTGGTCACGCAGACCGCCCGGACAGGCTCCATCGGCGTCATGATGGCTCACAGT 318
Query 4859 AACTATGGTGCTGCGCTCAAAACTAACGGCGTTGAGGTCTCGCTGATTTACAGCGGCGAT 4918
|| || ||||||||||| | | | || || || || |||||||||||||||||
Sbjct 317 AATTACGGTGCTGCGCTGGAGAAACAGGGTGTGGAAATCACGCTGATTTACAGCGGCAGC 258
Query 4919 CACAAGGTCGACGGCAACCCTTACGAAAAACTACCAGAAGATGTGCGTGCTGATTTCCAG 4978
|| ||||| || |||||||| ||| | || || || || || || | | |||
Sbjct 257 CATAAGGTGGATGGCAACCCCTACAGCCATCTTCCGGATGACGTCCGGGAGACACTGCAG 198
Query 4979 ACGCGTATCGATGCCACTCGTCAGATGTTCGCCGAAAAGGTTTCCGCTTATACCGGTATG 5038
| || || || || || || |||||||| || | ||||| || || |||||||| ||
Sbjct 197 TCCCGGATGGACGCAACCCGCCAGATGTTTGCGCAGAAGGTGTCGGCATATACCGGCCTG 138
Query 5039 TCCGTTCAGGACGTACTGGACACCGAAGCGGCAGTATTCTCCGGCCAGGAGTCAGTGGAC 5098
||||| |||| || ||||| ||||| || ||||| | | ||| |||||| | | ||
Sbjct 137 TCCGTGCAGGTTGTGCTGGATACCGAGGCTGCAGTGTACAGCGGTCAGGAGGCCATTGAT 78
Query 5099 AACGGTTTGGCGGATGAACTTGTTAACAATACCGATGCGCTCGGCGTGATGCGCGAAGCA 5158
||| |||| |||||||||||||||| ||||||||| || ||| ||||| || |||
Sbjct 77 GCCGGACTGGCTGATGAACTTGTTAACAGCACCGATGCGATCACCGTCATGCGTGATGCA 18
Query 5159 CTCGA 5163
|| ||
Sbjct 17 CTGGA 13
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148233393798640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |