Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1438 84.2 2e-11 >seq1438 Length=20597 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 97418 GCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAA 97477 ||||| ||||| |||||||||||||| | |||||||| ||| ||| ||| |||| Sbjct 1454 GCCTCACCTGGAAGCCATAAACAGGTCCTAAATCTCCTTCAGCTCGGTCAGTGAAGCCAA 1395 Query 97478 GCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC-AGATGCTGCA 97536 | | || | | | || ||||||||| ||||||||||| | ||||| || | Sbjct 1394 GTTGGTCGAGAAATTGCCGAGATCCATTGGCATCCCAAATTTTGACACCTTTATCAGATA 1335 Query 97537 AGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTC 97596 | |||||| | ||| ||||| || ||||| | ||| ||||| ||||| ||| || Sbjct 1334 AATGCTTTGC-ATTTGTATCTCCTCGAATGAACCATAGCAACTCTTCAACAACGCCTTTC 1276 Query 97597 CAAAATACTCTCTTAGTTGT 97616 ||| | || | || ||||| Sbjct 1275 CAATACACGCGTTTGGTTGT 1256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346675972449200