Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3028 96.9 3e-15 >seq3028 Length=62347 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || || ||||| || ||||| | || || |||||| Sbjct 28108 ACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATCCGATAACGTACGACCATCCTCC 28167 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || || |||| || ||||| || || || || || |||||||||||| Sbjct 28168 AGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGG 28227 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 |||||| |||||| | |||| || |||| |||| || || || | || | ||||| Sbjct 28228 ATTTTTGCTTTAACATTCTCGATCGTATCCGATGCT-TCCACTTCCAACGTTATGGTTTT 28286 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| |||||| || ||||| ||||| Sbjct 28287 ACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433695256407520