Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq4479 98.7 1e-15
seq1083 96.9 4e-15
>seq4479
Length=2672
Score = 98.7 bits (108), Expect = 1e-15
Identities = 77/90 (86%), Gaps = 3/90 (3%)
Strand=Plus/Plus
Query 60055 TGAAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112
|| |||| ||| |||| |||| ||||||||||||| |||||| | |||||||||||
Sbjct 2342 TGTAAAAGTTTGCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGG 2401
Query 60113 ATACTCACCACTATACTACCGAGGA-TTGA 60141
||||||||||||||||||||||||| ||||
Sbjct 2402 ATACTCACCACTATACTACCGAGGACTTGA 2431
Score = 95.1 bits (104), Expect = 1e-14
Identities = 72/84 (86%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 60056 GAAAA--ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113
||||| ||| |||| |||| ||||||||||||| |||||| | ||||||||||| |
Sbjct 1305 GAAAAGCATTGCCTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGA 1246
Query 60114 TACTCACCACTATACTACCGAGGA 60137
||||||||||||||||||||||||
Sbjct 1245 TACTCACCACTATACTACCGAGGA 1222
>seq1083
Length=22644
Score = 96.9 bits (106), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| |||||| | ||||||||||| |||||||||||||
Sbjct 2258 CTCCCCGGCCGGGAATCGAACCCGGGTCTCGCACGTGACAGGCGCGGATACTCACCACTA 2199
Query 60126 TACTACCGAGGATTGA 60141
|||||||||||| |||
Sbjct 2198 TACTACCGAGGACTGA 2183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571634904276800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |