Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq3028 102 6e-17
>seq3028
Length=62347
Score = 102 bits (112), Expect = 6e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTC 45186
|||||||| ||||| ||||||||||| || || || | | | | ||| | || ||
Sbjct 28108 ACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATCCGATAACGTA-CGACCATCCTC 28166
Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246
|||||| || ||||| || |||| ||||||||||| || || | ||||||||||||
Sbjct 28167 CAGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCTTG 28226
Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
|||||| ||||| | | | | ||| | ||||| |||| || || || ||
Sbjct 28227 GATTTTTGCTTTAACATTCTCGATCGTATCCGATGCTTCCACTTCCAACGTTATGGTTTT 28286
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||||| ||| ||||| || ||||||||
Sbjct 28287 ACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394952129136760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |