Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3028 102 6e-17 >seq3028 Length=62347 Score = 102 bits (112), Expect = 6e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTC 45186 |||||||| ||||| ||||||||||| || || || | | | | ||| | || || Sbjct 28108 ACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATCCGATAACGTA-CGACCATCCTC 28166 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 |||||| || ||||| || |||| ||||||||||| || || | |||||||||||| Sbjct 28167 CAGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCTTG 28226 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 |||||| ||||| | | | | ||| | ||||| |||| || || || || Sbjct 28227 GATTTTTGCTTTAACATTCTCGATCGTATCCGATGCTTCCACTTCCAACGTTATGGTTTT 28286 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||||| ||| ||||| || |||||||| Sbjct 28287 ACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394952129136760