Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq3028 87.8 2e-12
>seq3028
Length=62347
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||||||||| || || || |||| |||||||| |||||| | || |||||| | ||
Sbjct 28970 CATGCAAATTTTTGTGAAAACATTGACGGGCAAAACAATCACCTTAGAGGTTGAAGCCTC 28911
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | |||||| || ||| | ||| ||||||||||| | || || || ||
Sbjct 28910 TGATACAATCGAAAATGTGAAAGCCAAAATTCAAGACAAGGAAGGAATCCCACCAGATCA 28851
Query 31312 GCAGCGTCTAATATTCGCTGG 31332
||| ||||| || ||||||||
Sbjct 28850 GCAACGTCTTATTTTCGCTGG 28830
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || ||| |||| || ||||| || || | || || ||| | ||
Sbjct 28316 ATGCAAATTTTCGTGAAAACTTTGACGGGTAAAACCATAACGTTGGAAGTGGAAGCATCG 28257
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || ||| | ||| |||||||| || | || || |||||
Sbjct 28256 GATACGATCGAGAATGTTAAAGCAAAAATCCAAGACAAGGAGGGTATTCCACCAGACCAA 28197
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || || || || || || |||| || | || | ||||||||
Sbjct 28196 CAGCGACTGATCTTTGCCGGGAAGCAACTGGAGGATGGTCGTACGTTATCGGATTATAAT 28137
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| || |||||||| ||||| |||| |||
Sbjct 28136 ATTCAGAAGGAATCGACGCTTCACTTGGTTCTT 28104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445623977635200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |