Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq9745 131 3e-25 >seq9745 Length=3682 Score = 131 bits (144), Expect = 3e-25 Identities = 136/176 (77%), Gaps = 17/176 (10%) Strand=Plus/Plus Query 176672 GCTCTGCTTATATAGACCGCCCATAGGGCACGCCTACCGCCCATTGACGTGTAATGTGCG 176731 |||||||||||||||||| |||| | ||||||||||||||||| |||| Sbjct 1837 GCTCTGCTTATATAGACCTCCCACCGTACACGCCTACCGCCCATT-----------TGCG 1885 Query 176732 TCAATGGGGCGGGGT--TTATGACTCATATTGGAAATTCCCATTCATTTTGGTGCCAGAA 176789 |||||||||||| || ||| || ||| ||||||| |||| || |||||||||||| || Sbjct 1886 TCAATGGGGCGGAGTTGTTACGA--CATTTTGGAAAGTCCCGTTGATTTTGGTGCCAAAA 1943 Query 176790 CGGATGCCCATTGACGTCAATGGGGCGG-GATTATGGAAAGTCCCATTAGTCATAC 176844 | | ||||||||||||||||||| || || | |||||| ||| | ||||| || Sbjct 1944 CAAACTCCCATTGACGTCAATGGGGTGGAGACT-TGGAAATCCCCGTGAGTCAAAC 1998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771103953547200