Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1462 86.0 9e-12 seq1362 86.0 9e-12 >seq1462 Length=36103 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 79425 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 79484 ||| || || || || |||| || ||||||||||| || || || | |||||| ||||| Sbjct 14550 GAGGATGAAAGCATCAGCTAGGCCCTGAACACCAATGCCAATTGGACGATGTCTTTTATT 14609 Query 79485 AGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCT 79544 ||| ||| ||||| || | ||||||||||| ||| |||| |||||| | |||| | Sbjct 14610 AGATCGTTCCGCTTCCGGTACTGGATAATAATTGCGATCAATAACTTTATTCAAATTCTT 14669 Query 79545 GACTATTACTTT 79556 || | ||| || Sbjct 14670 AACCACTACCTT 14681 >seq1362 Length=15600 Score = 86.0 bits (94), Expect = 9e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 || ||||| |||| |||||||||||||||||||||||||| ||||| | |||||| Sbjct 4218 TTCTGGTACTCACTGACACGTTTTTCGAAAAAATTAGTTTTCCCTTCAATCGATATACGC 4159 Query 49729 TCCATGAAATCAAACGGATT 49748 ||||| |||||||| ||||| Sbjct 4158 TCCATAAAATCAAATGGATT 4139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718039313118400