Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1462 86.0 9e-12
seq1362 86.0 9e-12
>seq1462
Length=36103
Score = 86.0 bits (94), Expect = 9e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 79425 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 79484
||| || || || || |||| || ||||||||||| || || || | |||||| |||||
Sbjct 14550 GAGGATGAAAGCATCAGCTAGGCCCTGAACACCAATGCCAATTGGACGATGTCTTTTATT 14609
Query 79485 AGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCT 79544
||| ||| ||||| || | ||||||||||| ||| |||| |||||| | |||| |
Sbjct 14610 AGATCGTTCCGCTTCCGGTACTGGATAATAATTGCGATCAATAACTTTATTCAAATTCTT 14669
Query 79545 GACTATTACTTT 79556
|| | ||| ||
Sbjct 14670 AACCACTACCTT 14681
>seq1362
Length=15600
Score = 86.0 bits (94), Expect = 9e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|| ||||| |||| |||||||||||||||||||||||||| ||||| | ||||||
Sbjct 4218 TTCTGGTACTCACTGACACGTTTTTCGAAAAAATTAGTTTTCCCTTCAATCGATATACGC 4159
Query 49729 TCCATGAAATCAAACGGATT 49748
||||| |||||||| |||||
Sbjct 4158 TCCATAAAATCAAATGGATT 4139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718039313118400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |