Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq1448 105 7e-18
seq3028 84.2 2e-11
>seq1448
Length=39285
Score = 105 bits (116), Expect = 7e-18
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 143043 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTT 143102
|||| ||| | |||| ||||||||||| |||||||||||||| || || ||| ||
Sbjct 34874 TACCTGCAAAAATCAATCGTTGCTGATCTGGAGGTATGCCTTCCTTATCCTGAATCTTCG 34815
Query 143103 GTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 143162
||||| | ||| | || |||| || ||| ||||||| || | |||||| || || |
Sbjct 34814 CTTTTACATTTTCAATAGTATCCGAGGATTCGACTTCAAGCGTAATCGTCTTACCAGTTA 34755
Query 143163 ATGTTTTTACGAATATTTGCATA 143185
|||||||||| || |||||||||
Sbjct 34754 ATGTTTTTACAAAAATTTGCATA 34732
>seq3028
Length=62347
Score = 84.2 bits (92), Expect = 2e-11
Identities = 107/144 (74%), Gaps = 4/144 (3%)
Strand=Plus/Plus
Query 143043 TACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG-GTAATTTTT 143101
|||||||| | ||||| || || ||||| || || || ||||| ||||| ||| | ||
Sbjct 29603 TACCAGCAAAAATCAGGCGCTGTTGATCCGGTGGAATACCTTCCTTGTCTTGTA--TCTT 29660
Query 143102 TGTTTTAGCTGT-TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 143160
|| |||| | | || | |||||| | | ||| ||||| | || | || || || ||
Sbjct 29661 TGCTTTAACATTCTCAATCGTGTCTGAAGCTTCCACTTCTAGCGTAATTGTTTTTCCCGT 29720
Query 143161 CAATGTTTTTACGAATATTTGCAT 143184
||||||||||||||| ||||||||
Sbjct 29721 CAATGTTTTTACGAAGATTTGCAT 29744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506852408899200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |