Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq3028 87.8 1e-12
>seq3028
Length=62347
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892
|||| ||| | ||| || ||||| |||||||| ||||||| | || | ||||||
Sbjct 28108 ACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATCCGATAACGTACGACCATCCTCC 28167
Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952
|| || || || ||| | || |||| ||| || || || | ||||| |||||
Sbjct 28168 AGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGG 28227
Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCT-CCGTTTCGACGGTAATGGTTTT 19011
||||| ||| || | ||| ||||| | | ||| || ||| | || ||||||||
Sbjct 28228 ATTTTTGCTTTAACATTCTCGATCGTATC-CGATGCTTCCACTTCCAACGTTATGGTTTT 28286
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
||| || |||||||| || |||||||||||
Sbjct 28287 ACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414443655390640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |