Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq3028 87.8 1e-12 >seq3028 Length=62347 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | ||| || ||||| |||||||| ||||||| | || | |||||| Sbjct 28108 ACCAAGTGAAGCGTCGATTCCTTCTGAATATTATAATCCGATAACGTACGACCATCCTCC 28167 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 || || || || ||| | || |||| ||| || || || | ||||| ||||| Sbjct 28168 AGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCTTGG 28227 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCT-CCGTTTCGACGGTAATGGTTTT 19011 ||||| ||| || | ||| ||||| | | ||| || ||| | || |||||||| Sbjct 28228 ATTTTTGCTTTAACATTCTCGATCGTATC-CGATGCTTCCACTTCCAACGTTATGGTTTT 28286 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| || |||||||| || ||||||||||| Sbjct 28287 ACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414443655390640