Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_006273.2 Length=235646 Score E Sequences producing significant alignments: (Bits) Value seq9745 951 0.0 >seq9745 Length=3682 Score = 951 bits (1054), Expect = 0.0 Identities = 559/588 (95%), Gaps = 0/588 (0%) Strand=Plus/Plus Query 175063 GAGCTCTGCTTATATAGACCTCCCATAGTAAACGCCTACCGCCCATTTGCGTCAATGGGG 175122 ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 1835 GAGCTCTGCTTATATAGACCTCCCACCGTACACGCCTACCGCCCATTTGCGTCAATGGGG 1894 Query 175123 CGGAGTTATTACGACATTTTGGAAAGTCCCGTTGAATTTGGTGCCAAAACAAACTNNNNN 175182 ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1895 CGGAGTTGTTACGACATTTTGGAAAGTCCCGTTGATTTTGGTGCCAAAACAAACTCCCAT 1954 Query 175183 NNNNNNNNNNNNNNNNNNGACTTGGAAATCCCCGTGAGTCAAACCGCTATCCACGCCCAT 175242 |||||||||||||||||||||||||||||||||||||||||| Sbjct 1955 TGACGTCAATGGGGTGGAGACTTGGAAATCCCCGTGAGTCAAACCGCTATCCACGCCCAT 2014 Query 175243 TGATGTACTGCCAAAACCGCATCACCATGGTAATAGCGATGACTAATACGTAGATGTACT 175302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2015 TGATGTACTGCCAAAACCGCATCACCATGGTAATAGCGATGACTAATACGTAGATGTACT 2074 Query 175303 GCCAAGTAGGAAAGTCCCGTAAGGTCATGTACTGGGCATAATGCCAGGCGGGCCATTTAC 175362 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2075 GCCAAGTAGGAAAGTCCCATAAGGTCATGTACTGGGCATAATGCCAGGCGGGCCATTTAC 2134 Query 175363 CGTCATTGACGTCAATAGGGGGCGTACTTGGCATATGATACACTTGATGTACTGCCAAGT 175422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2135 CGTCATTGACGTCAATAGGGGGCGTACTTGGCATATGATACACTTGATGTACTGCCAAGT 2194 Query 175423 GGGCAGTTTACCGTAAATACTCCACCCATTGACGTCAATGGAAAGTCCCTATTGGCGTTA 175482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2195 GGGCAGTTTACCGTAAATACTCCACCCATTGACGTCAATGGAAAGTCCCTATTGGCGTTA 2254 Query 175483 CTATGGGAACATACGTCATTATTGACGTCAATGGGCGGGGGTCGTTGGGCGGTCAGCCAG 175542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2255 CTATGGGAACATACGTCATTATTGACGTCAATGGGCGGGGGTCGTTGGGCGGTCAGCCAG 2314 Query 175543 GCGGGCCATTTACCGTAAGTTATGTAACGCGGAACTCCATATATGGGCTATGAACTAATG 175602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2315 GCGGGCCATTTACCGTAAGTTATGTAACGCGGAACTCCATATATGGGCTATGAACTAATG 2374 Query 175603 ACCCCGTAATTGATTACTATTAATAACTAGTCAATAATCAATGTCAAC 175650 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2375 ACCCCGTAATTGATTACTATTAATAACTAGTCAATAATCAATGTCAAC 2422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753698316425600