Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_006273.2
Length=235646
Score E
Sequences producing significant alignments: (Bits) Value
seq9745 951 0.0
>seq9745
Length=3682
Score = 951 bits (1054), Expect = 0.0
Identities = 559/588 (95%), Gaps = 0/588 (0%)
Strand=Plus/Plus
Query 175063 GAGCTCTGCTTATATAGACCTCCCATAGTAAACGCCTACCGCCCATTTGCGTCAATGGGG 175122
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 1835 GAGCTCTGCTTATATAGACCTCCCACCGTACACGCCTACCGCCCATTTGCGTCAATGGGG 1894
Query 175123 CGGAGTTATTACGACATTTTGGAAAGTCCCGTTGAATTTGGTGCCAAAACAAACTNNNNN 175182
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1895 CGGAGTTGTTACGACATTTTGGAAAGTCCCGTTGATTTTGGTGCCAAAACAAACTCCCAT 1954
Query 175183 NNNNNNNNNNNNNNNNNNGACTTGGAAATCCCCGTGAGTCAAACCGCTATCCACGCCCAT 175242
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1955 TGACGTCAATGGGGTGGAGACTTGGAAATCCCCGTGAGTCAAACCGCTATCCACGCCCAT 2014
Query 175243 TGATGTACTGCCAAAACCGCATCACCATGGTAATAGCGATGACTAATACGTAGATGTACT 175302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2015 TGATGTACTGCCAAAACCGCATCACCATGGTAATAGCGATGACTAATACGTAGATGTACT 2074
Query 175303 GCCAAGTAGGAAAGTCCCGTAAGGTCATGTACTGGGCATAATGCCAGGCGGGCCATTTAC 175362
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2075 GCCAAGTAGGAAAGTCCCATAAGGTCATGTACTGGGCATAATGCCAGGCGGGCCATTTAC 2134
Query 175363 CGTCATTGACGTCAATAGGGGGCGTACTTGGCATATGATACACTTGATGTACTGCCAAGT 175422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2135 CGTCATTGACGTCAATAGGGGGCGTACTTGGCATATGATACACTTGATGTACTGCCAAGT 2194
Query 175423 GGGCAGTTTACCGTAAATACTCCACCCATTGACGTCAATGGAAAGTCCCTATTGGCGTTA 175482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2195 GGGCAGTTTACCGTAAATACTCCACCCATTGACGTCAATGGAAAGTCCCTATTGGCGTTA 2254
Query 175483 CTATGGGAACATACGTCATTATTGACGTCAATGGGCGGGGGTCGTTGGGCGGTCAGCCAG 175542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2255 CTATGGGAACATACGTCATTATTGACGTCAATGGGCGGGGGTCGTTGGGCGGTCAGCCAG 2314
Query 175543 GCGGGCCATTTACCGTAAGTTATGTAACGCGGAACTCCATATATGGGCTATGAACTAATG 175602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2315 GCGGGCCATTTACCGTAAGTTATGTAACGCGGAACTCCATATATGGGCTATGAACTAATG 2374
Query 175603 ACCCCGTAATTGATTACTATTAATAACTAGTCAATAATCAATGTCAAC 175650
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2375 ACCCCGTAATTGATTACTATTAATAACTAGTCAATAATCAATGTCAAC 2422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 753698316425600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |