Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1438 86.0 2e-11 >seq1438 Length=20597 Score = 86.0 bits (94), Expect = 2e-11 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 111318 CCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGTTT 111377 ||| | || ||||| || || |||||||| || |||| ||||| | || ||||| Sbjct 1247 CCAGTGCTGACAACCAAACGCGTGTATTGGAAAGGCGTTGTTGAAGAGTTGCTATGGTTC 1306 Query 111378 ATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGA 111437 ||||| ||| |||||||||||| | | | | ||| ||| ||||||||||||| Sbjct 1307 ATTCGAGGAGATACAAATGCAAAGCATTTATCTGATAAAGGTGTCAAAATTTGGGATGCC 1366 Query 111438 AATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTC-GACAACGAAGAAGGTGATCT 111496 |||||||| || | ||||| || | |||| ||| | ||| | ||||| ||| | Sbjct 1367 AATGGATCTCGGCAATTTCTCGACCAACTTGG-CTTCACTGACCGAGCTGAAGGAGATTT 1425 Query 111497 CGGACCAGTTTACGGATTTCA 111517 ||||| ||||| || || || Sbjct 1426 AGGACCTGTTTATGGCTTCCA 1446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302926767987920