Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq4926 131 1e-25
seq3028 114 9e-21
seq9760 113 3e-20
seq710 113 3e-20
seq7016 105 4e-18
seq4789 100 2e-16
seq16564 96.9 2e-15
seq610 95.1 8e-15
seq4104 93.3 3e-14
seq906 89.7 3e-13
seq5499 87.8 1e-12
>seq4926
Length=4618
Score = 131 bits (144), Expect = 1e-25
Identities = 86/95 (91%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct 575 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCGT 634
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| |||||||||||||| |||||||||||||
Sbjct 635 TAATCCATTCATGCGCGTCACGAATTAGATGACGA 669
>seq3028
Length=62347
Score = 114 bits (126), Expect = 9e-21
Identities = 167/235 (71%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 38084 ATCATTA-CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGT 38142
|||| || ||||| | | ||| | ||||| ||||| || ||||| |||||||| |
Sbjct 28082 ATCAATAGCCACCACGAAGACGAAGAACCAAGTGAAGCGTCGATTCCTTCTGAATATTAT 28141
Query 38143 AATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGAT 38202
|||| || || ||| | || || | ||| || |||||||| || || || ||||| |
Sbjct 28142 AATCCGATAACGTACGACCATCCTCCAGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGT 28201
Query 38203 CGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC 38262
| | || | || || ||||| |||||| || ||||||| || |||||
Sbjct 28202 CTGGTGGAATACCCTCCTTGTCTTGGATTTTTGCTTTAACATTCTCGATCGTATCCGATG 28261
Query 38263 TTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||| ||||| || || || |||||||||||||| ||||||||||| || |||||
Sbjct 28262 CTTCCACTTCCAACGTTATGGTTTTACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316
>seq9760
Length=3598
Score = 113 bits (124), Expect = 3e-20
Identities = 71/77 (92%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 3332 CTCTTTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCGT 3273
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 3272 GGTCGTATTTAGCCTTA 3256
>seq710
Length=53512
Score = 113 bits (124), Expect = 3e-20
Identities = 71/77 (92%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||
Sbjct 19462 CTCTCTCTTCAAAGTTCTTTGCAATTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCGT 19403
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 19402 GGTCGTATTTAGCCTTA 19386
>seq7016
Length=1159
Score = 105 bits (116), Expect = 4e-18
Identities = 70/78 (90%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 19946 TCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005
||| ||||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||
Sbjct 439 TCTTTCTCTTCAAAGTTCTTTGCAACTTTTCCTCACGGTACTTGTTTGCTATCGATCTCG 380
Query 20006 CGGTAATATTTAGCCTTA 20023
| | |||||||||||||
Sbjct 379 TGATCATATTTAGCCTTA 362
>seq4789
Length=4208
Score = 100 bits (110), Expect = 2e-16
Identities = 80/98 (82%), Gaps = 8/98 (8%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGGGT--------AATCT 25953
||||||||||||||| || |||||||||| |||| |||||||| | |||||
Sbjct 2229 AAGCCCGTTCCCTTGACTATGGTTTCGCTGGATATCAGATAGGGAGAGTGGGAGAAATCT 2170
Query 25954 CGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
||||||||| ||||||||| |||| |||||||||||||
Sbjct 2169 CGTTAATCCATTCATGCGCNTCACGAATTAGATGACGA 2132
>seq16564
Length=464
Score = 96.9 bits (106), Expect = 2e-15
Identities = 70/81 (86%), Gaps = 4/81 (5%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTT----GTTCGCTATCGGTC 20002
|| ||||||||||| ||||| ||||||||||| ||||||||| ||| ||||||||||
Sbjct 371 CTTTCTCTTCAAAGCTCTTTGCAACTTTCCCTTACGGTACTTACTTGTTTGCTATCGGTC 312
Query 20003 TCGCGGTAATATTTAGCCTTA 20023
||| ||| |||||||||||||
Sbjct 311 TCGTGGTNATATTTAGCCTTA 291
>seq610
Length=20606
Score = 95.1 bits (104), Expect = 8e-15
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 19945 TTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTC 20004
|||||||| || |||||||||| |||||| |||||||||||||||| ||||||||||||
Sbjct 9690 TTCTCTCTTTTTAAAGTTCTTTATAACTTTTCCTCACGGTACTTGTTTGCTATCGGTCTC 9631
Query 20005 GCGGTAATATTTAGC 20019
| ||| ||||||||
Sbjct 9630 GTGGTCGTATTTAGC 9616
>seq4104
Length=9822
Score = 93.3 bits (102), Expect = 3e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007
||||||||||||||| ||| |||||||||||||| ||||||||| | ||||||||| | |
Sbjct 1938 TCTCTCTTCAAAGTTTTTTGCAACTTTCCCTCACTGTACTTGTTTGTTATCGGTCTTGTG 1997
Query 20008 GTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 1998 ATCGTATTTAGCCTTA 2013
>seq906
Length=130
Score = 89.7 bits (98), Expect = 3e-13
Identities = 57/62 (92%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 19962 TCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCT 20021
||||| |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct 1 TCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCGTGGTCGTATTTAGCCT 60
Query 20022 TA 20023
||
Sbjct 61 TA 62
>seq5499
Length=13722
Score = 87.8 bits (96), Expect = 1e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007
||||| ||| ||||| ||| ||||||| ||||||||||||| || ||||||||||||| |
Sbjct 1805 TCTCTTTTCGAAGTTTTTTGCAACTTTTCCTCACGGTACTTATTTGCTATCGGTCTCGTG 1864
Query 20008 GTAATATTTAGCCTTA 20023
| |||||||||| ||
Sbjct 1865 ATCATATTTAGCCGTA 1880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334842859760360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |