Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4926 131 1e-25 seq3028 114 9e-21 seq9760 113 3e-20 seq710 113 3e-20 seq7016 105 4e-18 seq4789 100 2e-16 seq16564 96.9 2e-15 seq610 95.1 8e-15 seq4104 93.3 3e-14 seq906 89.7 3e-13 seq5499 87.8 1e-12 >seq4926 Length=4618 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct 575 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCGT 634 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||| ||||||||||||| Sbjct 635 TAATCCATTCATGCGCGTCACGAATTAGATGACGA 669 >seq3028 Length=62347 Score = 114 bits (126), Expect = 9e-21 Identities = 167/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 38084 ATCATTA-CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGT 38142 |||| || ||||| | | ||| | ||||| ||||| || ||||| |||||||| | Sbjct 28082 ATCAATAGCCACCACGAAGACGAAGAACCAAGTGAAGCGTCGATTCCTTCTGAATATTAT 28141 Query 38143 AATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGAT 38202 |||| || || ||| | || || | ||| || |||||||| || || || ||||| | Sbjct 28142 AATCCGATAACGTACGACCATCCTCCAGTTGCTTCCCGGCAAAGATCAGTCGCTGTTGGT 28201 Query 38203 CGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC 38262 | | || | || || ||||| |||||| || ||||||| || ||||| Sbjct 28202 CTGGTGGAATACCCTCCTTGTCTTGGATTTTTGCTTTAACATTCTCGATCGTATCCGATG 28261 Query 38263 TTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| ||||| || || || |||||||||||||| ||||||||||| || ||||| Sbjct 28262 CTTCCACTTCCAACGTTATGGTTTTACCCGTCAAAGTTTTCACGAAAATTTGCAT 28316 >seq9760 Length=3598 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 3332 CTCTTTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCGT 3273 Query 20007 GGTAATATTTAGCCTTA 20023 ||| |||||||||||| Sbjct 3272 GGTCGTATTTAGCCTTA 3256 >seq710 Length=53512 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| Sbjct 19462 CTCTCTCTTCAAAGTTCTTTGCAATTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCGT 19403 Query 20007 GGTAATATTTAGCCTTA 20023 ||| |||||||||||| Sbjct 19402 GGTCGTATTTAGCCTTA 19386 >seq7016 Length=1159 Score = 105 bits (116), Expect = 4e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 19946 TCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 ||| ||||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||| Sbjct 439 TCTTTCTCTTCAAAGTTCTTTGCAACTTTTCCTCACGGTACTTGTTTGCTATCGATCTCG 380 Query 20006 CGGTAATATTTAGCCTTA 20023 | | ||||||||||||| Sbjct 379 TGATCATATTTAGCCTTA 362 >seq4789 Length=4208 Score = 100 bits (110), Expect = 2e-16 Identities = 80/98 (82%), Gaps = 8/98 (8%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGGGT--------AATCT 25953 ||||||||||||||| || |||||||||| |||| |||||||| | ||||| Sbjct 2229 AAGCCCGTTCCCTTGACTATGGTTTCGCTGGATATCAGATAGGGAGAGTGGGAGAAATCT 2170 Query 25954 CGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||||| ||||||||| |||| ||||||||||||| Sbjct 2169 CGTTAATCCATTCATGCGCNTCACGAATTAGATGACGA 2132 >seq16564 Length=464 Score = 96.9 bits (106), Expect = 2e-15 Identities = 70/81 (86%), Gaps = 4/81 (5%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTT----GTTCGCTATCGGTC 20002 || ||||||||||| ||||| ||||||||||| ||||||||| ||| |||||||||| Sbjct 371 CTTTCTCTTCAAAGCTCTTTGCAACTTTCCCTTACGGTACTTACTTGTTTGCTATCGGTC 312 Query 20003 TCGCGGTAATATTTAGCCTTA 20023 ||| ||| ||||||||||||| Sbjct 311 TCGTGGTNATATTTAGCCTTA 291 >seq610 Length=20606 Score = 95.1 bits (104), Expect = 8e-15 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19945 TTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTC 20004 |||||||| || |||||||||| |||||| |||||||||||||||| |||||||||||| Sbjct 9690 TTCTCTCTTTTTAAAGTTCTTTATAACTTTTCCTCACGGTACTTGTTTGCTATCGGTCTC 9631 Query 20005 GCGGTAATATTTAGC 20019 | ||| |||||||| Sbjct 9630 GTGGTCGTATTTAGC 9616 >seq4104 Length=9822 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||||||||||||||| ||| |||||||||||||| ||||||||| | ||||||||| | | Sbjct 1938 TCTCTCTTCAAAGTTTTTTGCAACTTTCCCTCACTGTACTTGTTTGTTATCGGTCTTGTG 1997 Query 20008 GTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1998 ATCGTATTTAGCCTTA 2013 >seq906 Length=130 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 19962 TCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCT 20021 ||||| |||||||||||||||||||||||| ||||||||||||| ||| |||||||||| Sbjct 1 TCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCGTGGTCGTATTTAGCCT 60 Query 20022 TA 20023 || Sbjct 61 TA 62 >seq5499 Length=13722 Score = 87.8 bits (96), Expect = 1e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||||| ||| ||||| ||| ||||||| ||||||||||||| || ||||||||||||| | Sbjct 1805 TCTCTTTTCGAAGTTTTTTGCAACTTTTCCTCACGGTACTTATTTGCTATCGGTCTCGTG 1864 Query 20008 GTAATATTTAGCCTTA 20023 | |||||||||| || Sbjct 1865 ATCATATTTAGCCGTA 1880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334842859760360