Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23]
25,560 sequences; 84,888,114 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq3028 132 4e-26
>seq3028
Length=62347
Score = 132 bits (146), Expect = 4e-26
Identities = 160/215 (74%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || |||||||| |||||| |||| || | |||||||| | ||
Sbjct 28316 ATGCAAATTTTCGTGAAAACTTTGACGGGTAAAACCATAACGTTGGAAGTGGAAGCATCG 28257
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || |||||| | || ||||||||| || ||||| || || |||||||| |||
Sbjct 28256 GATACGATCGAG--AATGTTAAAGCAAAAATCCAA-GACAAGGAGGGTATTCCACCAGAC 28200
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | || |||||||| || ||| | || |||| ||| || | |||||
Sbjct 28199 CAACAGCGACTGATCTTTGCCGGGAAGCAACTGGAGGATGGTCGTACGTTATCGGATTAT 28140
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||| || ||||| ||||| || || || ||
Sbjct 28139 AATATTCAGAAGGAATCGACGCTTCACTTGGTTCT 28105
Score = 98.7 bits (108), Expect = 9e-16
Identities = 111/146 (76%), Gaps = 6/146 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || ||| | |||||||| | |||||| | |||||||| | |||
Sbjct 29369 ATGCAAATTTTTGTGAAAACTCTTACCGGTAAGACAATCACATTGGAAGTGGAAGCATCT 29310
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| |||||| | || |||| |||| || ||||||||||| |||||||| ||
Sbjct 29309 GACACCATCGAG--AATGTTAAAGCGAAAATCCAG-GACAAAGAAGGCATTCCACCAGAT 29253
Query 25116 CAACAGCGGATTATTTTTGCCGGCAA 25141
|| || ||| | ||||| || || ||
Sbjct 29252 CAGCAACGGTTGATTTTCGCTGGTAA 29227
Score = 82.4 bits (90), Expect = 7e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 25123 GGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTC 25182
||||||||||| | || || ||||||||||||| ||||||| | |||||| ||||| |
Sbjct 29073 GGATTATTTTTACAGGGAAGCAATTAGAAGATGGTCGCACTTTATCCGATTATAATATCC 29014
Query 25183 AAAAAGAATCCACGCTACATTTAGTGCT 25210
| ||||| ||||| || ||| | |||||
Sbjct 29013 AGAAAGAGTCCACACTCCATCTGGTGCT 28986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433193012911400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |