Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4081 100 6e-16 seq10559 98.7 2e-15 >seq4081 Length=440 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 74 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 15 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 14 CCCCGCATCGGGC 2 >seq10559 Length=2098 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 697 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 638 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 637 CCCGCATCGGGC 626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027500196295960